Experiment: KLEB28 MOI 1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS06860 and BWI76_RS06865 are separated by 163 nucleotides BWI76_RS06865 and BWI76_RS06870 are separated by 115 nucleotides BWI76_RS06870 and BWI76_RS06875 are separated by 201 nucleotides
BWI76_RS06860: BWI76_RS06860 - MFS transporter, at 1,440,204 to 1,441,424
_RS06860
BWI76_RS06865: BWI76_RS06865 - bifunctional UDP-sugar hydrolase/5'-nucleotidase, at 1,441,588 to 1,443,240
_RS06865
BWI76_RS06870: BWI76_RS06870 - aminoacyl-tRNA deacylase, at 1,443,356 to 1,443,835
_RS06870
BWI76_RS06875: BWI76_RS06875 - conjugal transfer protein TraB, at 1,444,037 to 1,444,831
_RS06875
Position (kb)
1441
1442
1443
1444 Strain fitness (log2 ratio)
-1
0
1 at 1440.769 kb on + strand, within BWI76_RS06860 at 1440.848 kb on + strand, within BWI76_RS06860 at 1440.991 kb on - strand, within BWI76_RS06860 at 1441.071 kb on + strand, within BWI76_RS06860 at 1441.117 kb on - strand, within BWI76_RS06860 at 1441.117 kb on - strand, within BWI76_RS06860 at 1441.124 kb on + strand, within BWI76_RS06860 at 1441.132 kb on - strand, within BWI76_RS06860 at 1441.132 kb on - strand, within BWI76_RS06860 at 1441.214 kb on + strand, within BWI76_RS06860 at 1441.217 kb on - strand at 1441.393 kb on + strand at 1441.393 kb on + strand at 1441.393 kb on + strand at 1441.398 kb on + strand at 1441.503 kb on - strand at 1441.773 kb on + strand, within BWI76_RS06865 at 1442.267 kb on + strand, within BWI76_RS06865 at 1442.695 kb on + strand, within BWI76_RS06865 at 1442.863 kb on + strand, within BWI76_RS06865 at 1442.886 kb on + strand, within BWI76_RS06865 at 1442.943 kb on + strand, within BWI76_RS06865 at 1443.032 kb on - strand, within BWI76_RS06865 at 1443.048 kb on + strand, within BWI76_RS06865 at 1443.169 kb on - strand at 1443.241 kb on + strand at 1443.249 kb on - strand at 1443.266 kb on + strand at 1443.478 kb on - strand, within BWI76_RS06870 at 1443.714 kb on + strand, within BWI76_RS06870 at 1443.721 kb on + strand, within BWI76_RS06870 at 1443.864 kb on - strand at 1443.881 kb on - strand at 1443.917 kb on + strand at 1444.180 kb on + strand, within BWI76_RS06875 at 1444.180 kb on + strand, within BWI76_RS06875 at 1444.188 kb on - strand, within BWI76_RS06875 at 1444.188 kb on - strand, within BWI76_RS06875 at 1444.188 kb on - strand, within BWI76_RS06875 at 1444.188 kb on - strand, within BWI76_RS06875 at 1444.188 kb on - strand, within BWI76_RS06875
Per-strain Table
Position Strand Gene LocusTag Fraction KLEB28 MOI 1 remove 1,440,769 + BWI76_RS06860 0.46 -0.6 1,440,848 + BWI76_RS06860 0.53 -0.0 1,440,991 - BWI76_RS06860 0.64 -0.1 1,441,071 + BWI76_RS06860 0.71 +0.1 1,441,117 - BWI76_RS06860 0.75 -0.1 1,441,117 - BWI76_RS06860 0.75 -0.6 1,441,124 + BWI76_RS06860 0.75 +0.0 1,441,132 - BWI76_RS06860 0.76 -0.2 1,441,132 - BWI76_RS06860 0.76 +0.1 1,441,214 + BWI76_RS06860 0.83 +0.4 1,441,217 - -0.2 1,441,393 + +0.8 1,441,393 + +0.2 1,441,393 + +0.5 1,441,398 + +0.1 1,441,503 - -0.7 1,441,773 + BWI76_RS06865 0.11 -0.2 1,442,267 + BWI76_RS06865 0.41 -0.7 1,442,695 + BWI76_RS06865 0.67 -0.1 1,442,863 + BWI76_RS06865 0.77 -1.7 1,442,886 + BWI76_RS06865 0.79 +0.2 1,442,943 + BWI76_RS06865 0.82 -0.3 1,443,032 - BWI76_RS06865 0.87 -0.9 1,443,048 + BWI76_RS06865 0.88 -0.6 1,443,169 - +0.5 1,443,241 + +0.1 1,443,249 - +0.0 1,443,266 + -0.8 1,443,478 - BWI76_RS06870 0.25 -0.2 1,443,714 + BWI76_RS06870 0.75 -0.0 1,443,721 + BWI76_RS06870 0.76 +0.4 1,443,864 - +0.4 1,443,881 - +0.2 1,443,917 + -0.2 1,444,180 + BWI76_RS06875 0.18 -0.2 1,444,180 + BWI76_RS06875 0.18 +0.5 1,444,188 - BWI76_RS06875 0.19 -0.0 1,444,188 - BWI76_RS06875 0.19 -0.0 1,444,188 - BWI76_RS06875 0.19 +0.3 1,444,188 - BWI76_RS06875 0.19 -0.2 1,444,188 - BWI76_RS06875 0.19 +0.4
Or see this region's nucleotide sequence