Experiment: KLEB25 MOI 1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS07965 and BWI76_RS07970 are separated by 71 nucleotides BWI76_RS07970 and BWI76_RS07975 are separated by 43 nucleotides BWI76_RS07975 and BWI76_RS07980 are separated by 195 nucleotides BWI76_RS07980 and BWI76_RS07985 are separated by 58 nucleotides BWI76_RS07985 and BWI76_RS07990 are separated by 91 nucleotides
BWI76_RS07965: BWI76_RS07965 - anaerobic C4-dicarboxylate transporter DcuC, at 1,691,704 to 1,693,077
_RS07965
BWI76_RS07970: BWI76_RS07970 - hypothetical protein, at 1,693,149 to 1,693,329
_RS07970
BWI76_RS07975: BWI76_RS07975 - phospholipid:lipid A palmitoyltransferase, at 1,693,373 to 1,693,942
_RS07975
BWI76_RS07980: BWI76_RS07980 - cold-shock protein, at 1,694,138 to 1,694,347
_RS07980
BWI76_RS07985: BWI76_RS07985 - fluoride ion transporter CrcB, at 1,694,406 to 1,694,789
_RS07985
BWI76_RS07990: BWI76_RS07990 - carbon-nitrogen hydrolase, at 1,694,881 to 1,695,669
_RS07990
Position (kb) 1693
1694 Strain fitness (log2 ratio) -1
0
1 at 1692.662 kb on - strand, within BWI76_RS07965 at 1692.913 kb on - strand, within BWI76_RS07965 at 1692.961 kb on + strand at 1692.961 kb on + strand at 1692.969 kb on - strand at 1693.102 kb on + strand at 1693.217 kb on + strand, within BWI76_RS07970 at 1693.225 kb on - strand, within BWI76_RS07970 at 1693.278 kb on + strand, within BWI76_RS07970 at 1693.278 kb on + strand, within BWI76_RS07970 at 1693.428 kb on - strand at 1693.554 kb on - strand, within BWI76_RS07975 at 1693.554 kb on - strand, within BWI76_RS07975 at 1693.668 kb on - strand, within BWI76_RS07975 at 1693.703 kb on - strand, within BWI76_RS07975 at 1693.729 kb on + strand, within BWI76_RS07975 at 1693.729 kb on + strand, within BWI76_RS07975 at 1693.886 kb on - strand at 1693.917 kb on - strand at 1694.157 kb on + strand at 1694.674 kb on - strand, within BWI76_RS07985
Per-strain Table
Position Strand Gene LocusTag Fraction KLEB25 MOI 1 remove 1,692,662 - BWI76_RS07965 0.70 -0.6 1,692,913 - BWI76_RS07965 0.88 -0.3 1,692,961 + -0.2 1,692,961 + -0.2 1,692,969 - -0.6 1,693,102 + +0.2 1,693,217 + BWI76_RS07970 0.38 -0.0 1,693,225 - BWI76_RS07970 0.42 +0.3 1,693,278 + BWI76_RS07970 0.71 +0.2 1,693,278 + BWI76_RS07970 0.71 -0.1 1,693,428 - -0.9 1,693,554 - BWI76_RS07975 0.32 +0.2 1,693,554 - BWI76_RS07975 0.32 -1.1 1,693,668 - BWI76_RS07975 0.52 -0.9 1,693,703 - BWI76_RS07975 0.58 -0.6 1,693,729 + BWI76_RS07975 0.62 -0.3 1,693,729 + BWI76_RS07975 0.62 -1.2 1,693,886 - +0.1 1,693,917 - -0.4 1,694,157 + -1.1 1,694,674 - BWI76_RS07985 0.70 +0.3
Or see this region's nucleotide sequence