Experiment: KLEB25 MOI 1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS21845 and BWI76_RS21850 are separated by 104 nucleotides BWI76_RS21850 and BWI76_RS21855 are separated by 71 nucleotides
BWI76_RS21845: BWI76_RS21845 - short-chain dehydrogenase/reductase, at 4,564,620 to 4,565,453
_RS21845
BWI76_RS21850: BWI76_RS21850 - AraC family transcriptional regulator, at 4,565,558 to 4,566,478
_RS21850
BWI76_RS21855: BWI76_RS21855 - hypothetical protein, at 4,566,550 to 4,567,788
_RS21855
Position (kb)
4565
4566
4567 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4564.585 kb on - strand at 4564.699 kb on - strand at 4564.706 kb on - strand, within BWI76_RS21845 at 4564.872 kb on + strand, within BWI76_RS21845 at 4564.880 kb on - strand, within BWI76_RS21845 at 4564.913 kb on - strand, within BWI76_RS21845 at 4564.931 kb on + strand, within BWI76_RS21845 at 4564.934 kb on - strand, within BWI76_RS21845 at 4564.938 kb on + strand, within BWI76_RS21845 at 4564.938 kb on + strand, within BWI76_RS21845 at 4564.938 kb on + strand, within BWI76_RS21845 at 4565.004 kb on + strand, within BWI76_RS21845 at 4565.073 kb on + strand, within BWI76_RS21845 at 4565.106 kb on - strand, within BWI76_RS21845 at 4565.178 kb on + strand, within BWI76_RS21845 at 4565.233 kb on + strand, within BWI76_RS21845 at 4565.594 kb on + strand at 4565.612 kb on - strand at 4565.758 kb on + strand, within BWI76_RS21850 at 4565.761 kb on - strand, within BWI76_RS21850 at 4565.771 kb on - strand, within BWI76_RS21850 at 4566.031 kb on - strand, within BWI76_RS21850 at 4566.075 kb on - strand, within BWI76_RS21850 at 4566.086 kb on + strand, within BWI76_RS21850 at 4566.146 kb on + strand at 4566.164 kb on + strand, within BWI76_RS21850 at 4566.277 kb on - strand, within BWI76_RS21850 at 4566.325 kb on + strand, within BWI76_RS21850 at 4566.399 kb on - strand at 4566.406 kb on + strand at 4566.406 kb on + strand at 4566.414 kb on - strand at 4566.414 kb on - strand at 4566.443 kb on + strand at 4566.473 kb on + strand at 4566.473 kb on + strand at 4566.473 kb on + strand at 4566.473 kb on + strand at 4566.481 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction KLEB25 MOI 1 remove 4,564,585 - -1.0 4,564,699 - -0.0 4,564,706 - BWI76_RS21845 0.10 -0.9 4,564,872 + BWI76_RS21845 0.30 -0.4 4,564,880 - BWI76_RS21845 0.31 -1.6 4,564,913 - BWI76_RS21845 0.35 +0.1 4,564,931 + BWI76_RS21845 0.37 -0.4 4,564,934 - BWI76_RS21845 0.38 +0.9 4,564,938 + BWI76_RS21845 0.38 +1.0 4,564,938 + BWI76_RS21845 0.38 -0.3 4,564,938 + BWI76_RS21845 0.38 -0.3 4,565,004 + BWI76_RS21845 0.46 +0.5 4,565,073 + BWI76_RS21845 0.54 -2.1 4,565,106 - BWI76_RS21845 0.58 -0.3 4,565,178 + BWI76_RS21845 0.67 -0.6 4,565,233 + BWI76_RS21845 0.74 -0.2 4,565,594 + -0.5 4,565,612 - -1.6 4,565,758 + BWI76_RS21850 0.22 -0.7 4,565,761 - BWI76_RS21850 0.22 -0.1 4,565,771 - BWI76_RS21850 0.23 -1.2 4,566,031 - BWI76_RS21850 0.51 -0.4 4,566,075 - BWI76_RS21850 0.56 -1.0 4,566,086 + BWI76_RS21850 0.57 -0.5 4,566,146 + +1.9 4,566,164 + BWI76_RS21850 0.66 -0.6 4,566,277 - BWI76_RS21850 0.78 -0.5 4,566,325 + BWI76_RS21850 0.83 +0.2 4,566,399 - -0.0 4,566,406 + +0.3 4,566,406 + -0.7 4,566,414 - -0.2 4,566,414 - +0.1 4,566,443 + -0.1 4,566,473 + +1.0 4,566,473 + +0.1 4,566,473 + +0.7 4,566,473 + +0.0 4,566,481 - +0.1
Or see this region's nucleotide sequence