Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS21850

Experiment: KLEB25 MOI 1

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS21845 and BWI76_RS21850 are separated by 104 nucleotidesBWI76_RS21850 and BWI76_RS21855 are separated by 71 nucleotides BWI76_RS21845: BWI76_RS21845 - short-chain dehydrogenase/reductase, at 4,564,620 to 4,565,453 _RS21845 BWI76_RS21850: BWI76_RS21850 - AraC family transcriptional regulator, at 4,565,558 to 4,566,478 _RS21850 BWI76_RS21855: BWI76_RS21855 - hypothetical protein, at 4,566,550 to 4,567,788 _RS21855 Position (kb) 4565 4566 4567Strain fitness (log2 ratio) -2 -1 0 1 2at 4564.585 kb on - strandat 4564.699 kb on - strandat 4564.706 kb on - strand, within BWI76_RS21845at 4564.872 kb on + strand, within BWI76_RS21845at 4564.880 kb on - strand, within BWI76_RS21845at 4564.913 kb on - strand, within BWI76_RS21845at 4564.931 kb on + strand, within BWI76_RS21845at 4564.934 kb on - strand, within BWI76_RS21845at 4564.938 kb on + strand, within BWI76_RS21845at 4564.938 kb on + strand, within BWI76_RS21845at 4564.938 kb on + strand, within BWI76_RS21845at 4565.004 kb on + strand, within BWI76_RS21845at 4565.073 kb on + strand, within BWI76_RS21845at 4565.106 kb on - strand, within BWI76_RS21845at 4565.178 kb on + strand, within BWI76_RS21845at 4565.233 kb on + strand, within BWI76_RS21845at 4565.594 kb on + strandat 4565.612 kb on - strandat 4565.758 kb on + strand, within BWI76_RS21850at 4565.761 kb on - strand, within BWI76_RS21850at 4565.771 kb on - strand, within BWI76_RS21850at 4566.031 kb on - strand, within BWI76_RS21850at 4566.075 kb on - strand, within BWI76_RS21850at 4566.086 kb on + strand, within BWI76_RS21850at 4566.146 kb on + strandat 4566.164 kb on + strand, within BWI76_RS21850at 4566.277 kb on - strand, within BWI76_RS21850at 4566.325 kb on + strand, within BWI76_RS21850at 4566.399 kb on - strandat 4566.406 kb on + strandat 4566.406 kb on + strandat 4566.414 kb on - strandat 4566.414 kb on - strandat 4566.443 kb on + strandat 4566.473 kb on + strandat 4566.473 kb on + strandat 4566.473 kb on + strandat 4566.473 kb on + strandat 4566.481 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction KLEB25 MOI 1
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4,564,585 - -1.0
4,564,699 - -0.0
4,564,706 - BWI76_RS21845 0.10 -0.9
4,564,872 + BWI76_RS21845 0.30 -0.4
4,564,880 - BWI76_RS21845 0.31 -1.6
4,564,913 - BWI76_RS21845 0.35 +0.1
4,564,931 + BWI76_RS21845 0.37 -0.4
4,564,934 - BWI76_RS21845 0.38 +0.9
4,564,938 + BWI76_RS21845 0.38 +1.0
4,564,938 + BWI76_RS21845 0.38 -0.3
4,564,938 + BWI76_RS21845 0.38 -0.3
4,565,004 + BWI76_RS21845 0.46 +0.5
4,565,073 + BWI76_RS21845 0.54 -2.1
4,565,106 - BWI76_RS21845 0.58 -0.3
4,565,178 + BWI76_RS21845 0.67 -0.6
4,565,233 + BWI76_RS21845 0.74 -0.2
4,565,594 + -0.5
4,565,612 - -1.6
4,565,758 + BWI76_RS21850 0.22 -0.7
4,565,761 - BWI76_RS21850 0.22 -0.1
4,565,771 - BWI76_RS21850 0.23 -1.2
4,566,031 - BWI76_RS21850 0.51 -0.4
4,566,075 - BWI76_RS21850 0.56 -1.0
4,566,086 + BWI76_RS21850 0.57 -0.5
4,566,146 + +1.9
4,566,164 + BWI76_RS21850 0.66 -0.6
4,566,277 - BWI76_RS21850 0.78 -0.5
4,566,325 + BWI76_RS21850 0.83 +0.2
4,566,399 - -0.0
4,566,406 + +0.3
4,566,406 + -0.7
4,566,414 - -0.2
4,566,414 - +0.1
4,566,443 + -0.1
4,566,473 + +1.0
4,566,473 + +0.1
4,566,473 + +0.7
4,566,473 + +0.0
4,566,481 - +0.1

Or see this region's nucleotide sequence