Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS14520
Experiment: KLEB25 MOI 1
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | KLEB25 MOI 1 |
---|---|---|---|---|---|
remove | |||||
3,032,035 | + | BWI76_RS14515 | 0.51 | -0.2 | |
3,032,187 | + | BWI76_RS14515 | 0.59 | -0.8 | |
3,032,386 | + | BWI76_RS14515 | 0.70 | -0.8 | |
3,032,660 | + | BWI76_RS14515 | 0.85 | -0.6 | |
3,032,668 | - | BWI76_RS14515 | 0.86 | -0.2 | |
3,032,713 | + | BWI76_RS14515 | 0.88 | +0.5 | |
3,032,836 | + | +0.4 | |||
3,032,906 | + | -2.5 | |||
3,032,938 | - | +0.3 | |||
3,033,117 | - | BWI76_RS14520 | 0.12 | -1.0 | |
3,033,497 | - | BWI76_RS14520 | 0.33 | -1.1 | |
3,034,100 | + | BWI76_RS14520 | 0.66 | -1.3 | |
3,034,181 | - | BWI76_RS14520 | 0.71 | -1.1 | |
3,034,362 | + | BWI76_RS14520 | 0.81 | -0.6 | |
3,034,391 | - | BWI76_RS14520 | 0.82 | -1.0 | |
3,034,451 | + | BWI76_RS14520 | 0.86 | +0.3 | |
3,034,481 | - | BWI76_RS14520 | 0.87 | -1.0 | |
3,034,539 | - | -0.1 | |||
3,034,541 | - | +1.3 | |||
3,034,832 | + | -0.1 | |||
3,034,845 | - | +0.7 | |||
3,034,847 | + | +0.1 | |||
3,034,996 | + | BWI76_RS14525 | 0.12 | +0.2 | |
3,035,061 | + | BWI76_RS14525 | 0.19 | +0.4 | |
3,035,205 | - | BWI76_RS14525 | 0.34 | +0.3 | |
3,035,230 | - | BWI76_RS14525 | 0.37 | +0.0 | |
3,035,456 | + | BWI76_RS14525 | 0.60 | -1.9 |
Or see this region's nucleotide sequence