Experiment: KLEB25 MOI 1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS06620 and BWI76_RS06625 are separated by 14 nucleotides BWI76_RS06625 and BWI76_RS06630 are separated by 220 nucleotides BWI76_RS06630 and BWI76_RS06635 are separated by 37 nucleotides
BWI76_RS06620: BWI76_RS06620 - LysR family transcriptional regulator, at 1,391,980 to 1,392,921
_RS06620
BWI76_RS06625: BWI76_RS06625 - acyl-CoA thioesterase II, at 1,392,936 to 1,393,811
_RS06625
BWI76_RS06630: BWI76_RS06630 - hypothetical protein, at 1,394,032 to 1,394,541
_RS06630
BWI76_RS06635: BWI76_RS06635 - methylated-DNA--protein-cysteine methyltransferase, at 1,394,579 to 1,394,890
_RS06635
Position (kb)
1392
1393
1394 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 1391.966 kb on + strand at 1392.002 kb on + strand at 1392.002 kb on + strand at 1392.038 kb on - strand at 1392.043 kb on + strand at 1392.043 kb on + strand at 1392.043 kb on + strand at 1392.043 kb on + strand at 1392.043 kb on + strand at 1392.043 kb on + strand at 1392.043 kb on + strand at 1392.043 kb on + strand at 1392.043 kb on + strand at 1392.044 kb on + strand at 1392.050 kb on + strand at 1392.050 kb on + strand at 1392.050 kb on + strand at 1392.050 kb on + strand at 1392.050 kb on + strand at 1392.050 kb on + strand at 1392.050 kb on + strand at 1392.050 kb on + strand at 1392.050 kb on + strand at 1392.050 kb on + strand at 1392.050 kb on + strand at 1392.050 kb on + strand at 1392.050 kb on + strand at 1392.050 kb on + strand at 1392.050 kb on + strand at 1392.050 kb on + strand at 1392.050 kb on + strand at 1392.050 kb on + strand at 1392.050 kb on + strand at 1392.050 kb on + strand at 1392.050 kb on + strand at 1392.050 kb on + strand at 1392.050 kb on + strand at 1392.050 kb on + strand at 1392.050 kb on + strand at 1392.050 kb on + strand at 1392.050 kb on + strand at 1392.050 kb on + strand at 1392.050 kb on + strand at 1392.050 kb on + strand at 1392.051 kb on + strand at 1392.051 kb on - strand at 1392.051 kb on - strand at 1392.051 kb on - strand at 1392.051 kb on - strand at 1392.051 kb on - strand at 1392.056 kb on + strand at 1392.056 kb on + strand at 1392.056 kb on + strand at 1392.056 kb on + strand at 1392.056 kb on + strand at 1392.056 kb on + strand at 1392.058 kb on - strand at 1392.058 kb on - strand at 1392.058 kb on - strand at 1392.058 kb on - strand at 1392.058 kb on - strand at 1392.058 kb on - strand at 1392.058 kb on - strand at 1392.058 kb on - strand at 1392.058 kb on - strand at 1392.058 kb on - strand at 1392.058 kb on - strand at 1392.058 kb on - strand at 1392.058 kb on - strand at 1392.058 kb on - strand at 1392.058 kb on - strand at 1392.058 kb on - strand at 1392.058 kb on - strand at 1392.058 kb on - strand at 1392.058 kb on - strand at 1392.058 kb on - strand at 1392.058 kb on - strand at 1392.058 kb on - strand at 1392.058 kb on - strand at 1392.058 kb on - strand at 1392.058 kb on - strand at 1392.058 kb on - strand at 1392.058 kb on - strand at 1392.058 kb on - strand at 1392.058 kb on - strand at 1392.058 kb on - strand at 1392.058 kb on - strand at 1392.058 kb on - strand at 1392.058 kb on - strand at 1392.058 kb on - strand at 1392.058 kb on - strand at 1392.058 kb on - strand at 1392.058 kb on - strand at 1392.058 kb on - strand at 1392.058 kb on - strand at 1392.058 kb on - strand at 1392.058 kb on - strand at 1392.059 kb on - strand at 1392.059 kb on - strand at 1392.059 kb on - strand at 1392.064 kb on - strand at 1392.064 kb on - strand at 1392.064 kb on - strand at 1392.064 kb on - strand at 1392.064 kb on - strand at 1392.064 kb on - strand at 1392.064 kb on - strand at 1392.064 kb on - strand at 1392.110 kb on + strand, within BWI76_RS06620 at 1392.110 kb on + strand, within BWI76_RS06620 at 1392.112 kb on - strand, within BWI76_RS06620 at 1392.135 kb on + strand, within BWI76_RS06620 at 1392.135 kb on + strand, within BWI76_RS06620 at 1392.135 kb on + strand, within BWI76_RS06620 at 1392.135 kb on + strand, within BWI76_RS06620 at 1392.135 kb on + strand, within BWI76_RS06620 at 1392.140 kb on + strand, within BWI76_RS06620 at 1392.140 kb on + strand, within BWI76_RS06620 at 1392.143 kb on - strand, within BWI76_RS06620 at 1392.143 kb on - strand, within BWI76_RS06620 at 1392.143 kb on - strand, within BWI76_RS06620 at 1392.148 kb on - strand, within BWI76_RS06620 at 1392.160 kb on - strand, within BWI76_RS06620 at 1392.203 kb on + strand, within BWI76_RS06620 at 1392.213 kb on - strand, within BWI76_RS06620 at 1392.220 kb on + strand, within BWI76_RS06620 at 1392.238 kb on - strand, within BWI76_RS06620 at 1392.243 kb on + strand, within BWI76_RS06620 at 1392.243 kb on + strand, within BWI76_RS06620 at 1392.243 kb on + strand, within BWI76_RS06620 at 1392.243 kb on + strand, within BWI76_RS06620 at 1392.243 kb on + strand, within BWI76_RS06620 at 1392.245 kb on + strand, within BWI76_RS06620 at 1392.251 kb on - strand, within BWI76_RS06620 at 1392.253 kb on + strand, within BWI76_RS06620 at 1392.255 kb on + strand, within BWI76_RS06620 at 1392.255 kb on + strand, within BWI76_RS06620 at 1392.269 kb on + strand, within BWI76_RS06620 at 1392.269 kb on + strand, within BWI76_RS06620 at 1392.269 kb on + strand, within BWI76_RS06620 at 1392.269 kb on + strand, within BWI76_RS06620 at 1392.277 kb on - strand, within BWI76_RS06620 at 1392.412 kb on + strand, within BWI76_RS06620 at 1392.423 kb on + strand, within BWI76_RS06620 at 1392.500 kb on + strand, within BWI76_RS06620 at 1392.500 kb on + strand at 1392.500 kb on + strand, within BWI76_RS06620 at 1392.500 kb on + strand, within BWI76_RS06620 at 1392.500 kb on + strand, within BWI76_RS06620 at 1392.500 kb on + strand, within BWI76_RS06620 at 1392.500 kb on + strand, within BWI76_RS06620 at 1392.500 kb on + strand, within BWI76_RS06620 at 1392.500 kb on + strand, within BWI76_RS06620 at 1392.500 kb on + strand, within BWI76_RS06620 at 1392.500 kb on + strand, within BWI76_RS06620 at 1392.500 kb on + strand, within BWI76_RS06620 at 1392.500 kb on + strand, within BWI76_RS06620 at 1392.500 kb on + strand, within BWI76_RS06620 at 1392.500 kb on + strand, within BWI76_RS06620 at 1392.500 kb on + strand, within BWI76_RS06620 at 1392.500 kb on + strand, within BWI76_RS06620 at 1392.500 kb on + strand, within BWI76_RS06620 at 1392.500 kb on + strand, within BWI76_RS06620 at 1392.500 kb on + strand, within BWI76_RS06620 at 1392.500 kb on + strand, within BWI76_RS06620 at 1392.500 kb on + strand, within BWI76_RS06620 at 1392.500 kb on + strand, within BWI76_RS06620 at 1392.500 kb on + strand, within BWI76_RS06620 at 1392.500 kb on + strand, within BWI76_RS06620 at 1392.500 kb on + strand, within BWI76_RS06620 at 1392.500 kb on + strand, within BWI76_RS06620 at 1392.500 kb on + strand, within BWI76_RS06620 at 1392.500 kb on + strand, within BWI76_RS06620 at 1392.500 kb on + strand, within BWI76_RS06620 at 1392.500 kb on + strand, within BWI76_RS06620 at 1392.508 kb on + strand, within BWI76_RS06620 at 1392.508 kb on - strand at 1392.508 kb on - strand, within BWI76_RS06620 at 1392.508 kb on - strand, within BWI76_RS06620 at 1392.508 kb on - strand, within BWI76_RS06620 at 1392.508 kb on - strand, within BWI76_RS06620 at 1392.508 kb on - strand, within BWI76_RS06620 at 1392.508 kb on - strand, within BWI76_RS06620 at 1392.508 kb on - strand, within BWI76_RS06620 at 1392.508 kb on - strand, within BWI76_RS06620 at 1392.510 kb on + strand, within BWI76_RS06620 at 1392.510 kb on + strand, within BWI76_RS06620 at 1392.571 kb on + strand, within BWI76_RS06620 at 1392.573 kb on + strand, within BWI76_RS06620 at 1392.573 kb on + strand, within BWI76_RS06620 at 1392.581 kb on + strand, within BWI76_RS06620 at 1392.581 kb on - strand, within BWI76_RS06620 at 1392.581 kb on - strand, within BWI76_RS06620 at 1392.581 kb on - strand, within BWI76_RS06620 at 1392.586 kb on + strand, within BWI76_RS06620 at 1392.586 kb on + strand, within BWI76_RS06620 at 1392.586 kb on + strand, within BWI76_RS06620 at 1392.594 kb on - strand, within BWI76_RS06620 at 1392.594 kb on - strand, within BWI76_RS06620 at 1392.594 kb on - strand, within BWI76_RS06620 at 1392.594 kb on - strand, within BWI76_RS06620 at 1392.594 kb on - strand, within BWI76_RS06620 at 1392.594 kb on - strand, within BWI76_RS06620 at 1392.611 kb on + strand, within BWI76_RS06620 at 1392.619 kb on - strand, within BWI76_RS06620 at 1392.621 kb on + strand, within BWI76_RS06620 at 1392.626 kb on + strand, within BWI76_RS06620 at 1392.626 kb on + strand, within BWI76_RS06620 at 1392.634 kb on - strand, within BWI76_RS06620 at 1392.671 kb on + strand, within BWI76_RS06620 at 1392.690 kb on + strand, within BWI76_RS06620 at 1392.698 kb on + strand, within BWI76_RS06620 at 1392.706 kb on - strand, within BWI76_RS06620 at 1392.737 kb on + strand, within BWI76_RS06620 at 1392.778 kb on - strand, within BWI76_RS06620 at 1392.785 kb on + strand, within BWI76_RS06620 at 1392.795 kb on + strand, within BWI76_RS06620 at 1392.898 kb on + strand at 1392.905 kb on + strand at 1392.983 kb on - strand at 1392.983 kb on - strand at 1393.013 kb on - strand at 1393.079 kb on - strand, within BWI76_RS06625 at 1393.191 kb on - strand, within BWI76_RS06625 at 1393.266 kb on + strand, within BWI76_RS06625 at 1393.492 kb on - strand, within BWI76_RS06625 at 1393.667 kb on + strand, within BWI76_RS06625 at 1393.675 kb on - strand, within BWI76_RS06625 at 1393.811 kb on + strand at 1393.871 kb on - strand at 1393.872 kb on - strand at 1393.934 kb on + strand at 1393.944 kb on + strand at 1393.992 kb on + strand at 1394.151 kb on + strand, within BWI76_RS06630 at 1394.325 kb on + strand, within BWI76_RS06630 at 1394.387 kb on + strand, within BWI76_RS06630 at 1394.439 kb on - strand, within BWI76_RS06630 at 1394.531 kb on - strand at 1394.627 kb on + strand, within BWI76_RS06635 at 1394.735 kb on + strand, within BWI76_RS06635 at 1394.744 kb on - strand, within BWI76_RS06635
Per-strain Table
Position Strand Gene LocusTag Fraction KLEB25 MOI 1 remove 1,391,966 + -0.5 1,392,002 + -0.2 1,392,002 + -0.0 1,392,038 - -0.5 1,392,043 + -0.4 1,392,043 + -1.0 1,392,043 + -1.4 1,392,043 + -1.0 1,392,043 + +0.0 1,392,043 + -0.4 1,392,043 + -0.7 1,392,043 + +0.8 1,392,043 + +0.6 1,392,044 + +0.1 1,392,050 + -0.0 1,392,050 + +0.2 1,392,050 + +1.4 1,392,050 + -0.3 1,392,050 + +0.5 1,392,050 + -0.2 1,392,050 + +0.2 1,392,050 + +0.0 1,392,050 + -1.5 1,392,050 + +0.6 1,392,050 + -1.4 1,392,050 + -0.7 1,392,050 + +1.5 1,392,050 + -0.5 1,392,050 + +2.4 1,392,050 + -0.1 1,392,050 + +0.2 1,392,050 + -1.4 1,392,050 + -1.5 1,392,050 + -0.5 1,392,050 + +0.7 1,392,050 + -0.1 1,392,050 + -0.5 1,392,050 + -0.8 1,392,050 + -0.2 1,392,050 + +0.0 1,392,050 + +2.6 1,392,050 + +0.2 1,392,050 + -0.8 1,392,050 + -0.3 1,392,051 + -0.5 1,392,051 - -0.2 1,392,051 - +0.0 1,392,051 - +0.2 1,392,051 - -0.3 1,392,051 - +0.0 1,392,056 + -1.1 1,392,056 + -1.2 1,392,056 + -0.5 1,392,056 + -0.5 1,392,056 + +0.7 1,392,056 + -0.1 1,392,058 - -2.0 1,392,058 - +0.6 1,392,058 - -1.2 1,392,058 - -0.0 1,392,058 - -1.0 1,392,058 - +0.8 1,392,058 - -0.7 1,392,058 - +0.8 1,392,058 - +0.2 1,392,058 - +1.0 1,392,058 - +2.9 1,392,058 - -1.5 1,392,058 - +0.9 1,392,058 - -0.3 1,392,058 - -0.3 1,392,058 - -0.7 1,392,058 - -0.1 1,392,058 - +0.1 1,392,058 - +2.8 1,392,058 - -0.4 1,392,058 - +0.3 1,392,058 - +1.5 1,392,058 - +0.2 1,392,058 - -0.9 1,392,058 - +1.3 1,392,058 - +0.0 1,392,058 - -0.8 1,392,058 - +0.2 1,392,058 - -0.0 1,392,058 - +0.4 1,392,058 - +0.2 1,392,058 - -0.6 1,392,058 - +0.7 1,392,058 - -0.2 1,392,058 - +1.3 1,392,058 - +0.3 1,392,058 - +2.5 1,392,058 - +0.3 1,392,058 - -0.3 1,392,058 - +0.7 1,392,058 - +0.1 1,392,059 - -2.7 1,392,059 - +0.4 1,392,059 - -0.1 1,392,064 - -0.6 1,392,064 - -0.1 1,392,064 - +0.3 1,392,064 - +0.7 1,392,064 - -1.1 1,392,064 - -0.2 1,392,064 - -1.4 1,392,064 - +0.1 1,392,110 + BWI76_RS06620 0.14 +0.3 1,392,110 + BWI76_RS06620 0.14 -1.0 1,392,112 - BWI76_RS06620 0.14 -0.4 1,392,135 + BWI76_RS06620 0.16 -0.7 1,392,135 + BWI76_RS06620 0.16 -1.8 1,392,135 + BWI76_RS06620 0.16 -0.7 1,392,135 + BWI76_RS06620 0.16 -1.0 1,392,135 + BWI76_RS06620 0.16 -0.4 1,392,140 + BWI76_RS06620 0.17 -1.2 1,392,140 + BWI76_RS06620 0.17 -1.0 1,392,143 - BWI76_RS06620 0.17 +0.4 1,392,143 - BWI76_RS06620 0.17 -0.5 1,392,143 - BWI76_RS06620 0.17 +0.0 1,392,148 - BWI76_RS06620 0.18 +0.9 1,392,160 - BWI76_RS06620 0.19 -0.7 1,392,203 + BWI76_RS06620 0.24 -0.7 1,392,213 - BWI76_RS06620 0.25 +0.5 1,392,220 + BWI76_RS06620 0.25 +0.3 1,392,238 - BWI76_RS06620 0.27 -0.8 1,392,243 + BWI76_RS06620 0.28 -0.4 1,392,243 + BWI76_RS06620 0.28 +0.1 1,392,243 + BWI76_RS06620 0.28 +0.1 1,392,243 + BWI76_RS06620 0.28 +0.1 1,392,243 + BWI76_RS06620 0.28 -1.3 1,392,245 + BWI76_RS06620 0.28 -0.4 1,392,251 - BWI76_RS06620 0.29 +1.9 1,392,253 + BWI76_RS06620 0.29 +0.1 1,392,255 + BWI76_RS06620 0.29 -0.7 1,392,255 + BWI76_RS06620 0.29 +0.5 1,392,269 + BWI76_RS06620 0.31 -0.7 1,392,269 + BWI76_RS06620 0.31 +0.7 1,392,269 + BWI76_RS06620 0.31 +0.8 1,392,269 + BWI76_RS06620 0.31 -0.4 1,392,277 - BWI76_RS06620 0.32 -0.5 1,392,412 + BWI76_RS06620 0.46 -0.1 1,392,423 + BWI76_RS06620 0.47 -0.8 1,392,500 + BWI76_RS06620 0.55 +0.4 1,392,500 + -0.8 1,392,500 + BWI76_RS06620 0.55 +0.0 1,392,500 + BWI76_RS06620 0.55 +0.7 1,392,500 + BWI76_RS06620 0.55 -0.5 1,392,500 + BWI76_RS06620 0.55 -1.5 1,392,500 + BWI76_RS06620 0.55 -0.2 1,392,500 + BWI76_RS06620 0.55 +0.2 1,392,500 + BWI76_RS06620 0.55 +0.8 1,392,500 + BWI76_RS06620 0.55 -0.2 1,392,500 + BWI76_RS06620 0.55 -0.1 1,392,500 + BWI76_RS06620 0.55 -0.2 1,392,500 + BWI76_RS06620 0.55 -0.5 1,392,500 + BWI76_RS06620 0.55 +0.0 1,392,500 + BWI76_RS06620 0.55 -0.3 1,392,500 + BWI76_RS06620 0.55 -0.1 1,392,500 + BWI76_RS06620 0.55 +0.1 1,392,500 + BWI76_RS06620 0.55 +0.1 1,392,500 + BWI76_RS06620 0.55 +0.1 1,392,500 + BWI76_RS06620 0.55 -0.1 1,392,500 + BWI76_RS06620 0.55 +0.2 1,392,500 + BWI76_RS06620 0.55 -0.3 1,392,500 + BWI76_RS06620 0.55 -0.1 1,392,500 + BWI76_RS06620 0.55 +0.6 1,392,500 + BWI76_RS06620 0.55 -0.3 1,392,500 + BWI76_RS06620 0.55 +0.8 1,392,500 + BWI76_RS06620 0.55 +1.5 1,392,500 + BWI76_RS06620 0.55 -0.7 1,392,500 + BWI76_RS06620 0.55 +0.1 1,392,500 + BWI76_RS06620 0.55 -0.4 1,392,500 + BWI76_RS06620 0.55 -0.2 1,392,508 + BWI76_RS06620 0.56 +0.1 1,392,508 - +0.5 1,392,508 - BWI76_RS06620 0.56 +0.0 1,392,508 - BWI76_RS06620 0.56 +0.3 1,392,508 - BWI76_RS06620 0.56 +0.0 1,392,508 - BWI76_RS06620 0.56 -0.1 1,392,508 - BWI76_RS06620 0.56 -0.3 1,392,508 - BWI76_RS06620 0.56 -1.0 1,392,508 - BWI76_RS06620 0.56 -0.1 1,392,508 - BWI76_RS06620 0.56 +1.0 1,392,510 + BWI76_RS06620 0.56 -0.2 1,392,510 + BWI76_RS06620 0.56 +0.1 1,392,571 + BWI76_RS06620 0.63 -0.2 1,392,573 + BWI76_RS06620 0.63 -0.1 1,392,573 + BWI76_RS06620 0.63 +0.1 1,392,581 + BWI76_RS06620 0.64 -0.7 1,392,581 - BWI76_RS06620 0.64 -0.8 1,392,581 - BWI76_RS06620 0.64 +0.5 1,392,581 - BWI76_RS06620 0.64 -0.8 1,392,586 + BWI76_RS06620 0.64 +0.0 1,392,586 + BWI76_RS06620 0.64 -0.2 1,392,586 + BWI76_RS06620 0.64 -0.3 1,392,594 - BWI76_RS06620 0.65 +0.2 1,392,594 - BWI76_RS06620 0.65 -0.7 1,392,594 - BWI76_RS06620 0.65 -0.5 1,392,594 - BWI76_RS06620 0.65 +0.8 1,392,594 - BWI76_RS06620 0.65 -1.9 1,392,594 - BWI76_RS06620 0.65 +1.3 1,392,611 + BWI76_RS06620 0.67 +0.6 1,392,619 - BWI76_RS06620 0.68 +0.6 1,392,621 + BWI76_RS06620 0.68 -0.0 1,392,626 + BWI76_RS06620 0.69 -0.3 1,392,626 + BWI76_RS06620 0.69 -0.5 1,392,634 - BWI76_RS06620 0.69 +2.0 1,392,671 + BWI76_RS06620 0.73 +0.1 1,392,690 + BWI76_RS06620 0.75 +0.4 1,392,698 + BWI76_RS06620 0.76 -0.9 1,392,706 - BWI76_RS06620 0.77 +0.1 1,392,737 + BWI76_RS06620 0.80 +0.4 1,392,778 - BWI76_RS06620 0.85 +0.7 1,392,785 + BWI76_RS06620 0.85 -0.4 1,392,795 + BWI76_RS06620 0.87 +0.2 1,392,898 + +0.5 1,392,905 + -1.7 1,392,983 - +0.3 1,392,983 - -0.8 1,393,013 - -0.1 1,393,079 - BWI76_RS06625 0.16 -2.5 1,393,191 - BWI76_RS06625 0.29 +0.2 1,393,266 + BWI76_RS06625 0.38 -0.8 1,393,492 - BWI76_RS06625 0.63 -1.5 1,393,667 + BWI76_RS06625 0.83 -2.1 1,393,675 - BWI76_RS06625 0.84 -1.4 1,393,811 + +1.6 1,393,871 - +0.3 1,393,872 - -1.0 1,393,934 + -1.2 1,393,944 + -1.7 1,393,992 + -0.1 1,394,151 + BWI76_RS06630 0.23 -0.4 1,394,325 + BWI76_RS06630 0.57 -0.5 1,394,387 + BWI76_RS06630 0.70 -1.5 1,394,439 - BWI76_RS06630 0.80 -0.0 1,394,531 - -0.8 1,394,627 + BWI76_RS06635 0.15 -0.2 1,394,735 + BWI76_RS06635 0.50 +0.4 1,394,744 - BWI76_RS06635 0.53 +1.1
Or see this region's nucleotide sequence