Experiment: KLEB15 MOI 0.1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS19955 and BWI76_RS19960 are separated by 9 nucleotides BWI76_RS19960 and BWI76_RS19965 are separated by 271 nucleotides
BWI76_RS19955: BWI76_RS19955 - glycerophosphoryl diester phosphodiesterase, at 4,179,031 to 4,180,101
_RS19955
BWI76_RS19960: BWI76_RS19960 - MFS transporter, at 4,180,111 to 4,181,457
_RS19960
BWI76_RS19965: BWI76_RS19965 - sn-glycerol-3-phosphate dehydrogenase subunit A, at 4,181,729 to 4,183,351
_RS19965
Position (kb)
4180
4181
4182 Strain fitness (log2 ratio)
-1
0
1 at 4179.269 kb on - strand, within BWI76_RS19955 at 4179.346 kb on - strand, within BWI76_RS19955 at 4179.401 kb on + strand, within BWI76_RS19955 at 4179.409 kb on - strand, within BWI76_RS19955 at 4179.461 kb on + strand, within BWI76_RS19955 at 4179.562 kb on - strand, within BWI76_RS19955 at 4179.678 kb on - strand, within BWI76_RS19955 at 4180.070 kb on + strand at 4180.636 kb on + strand, within BWI76_RS19960 at 4180.880 kb on + strand, within BWI76_RS19960 at 4180.972 kb on + strand, within BWI76_RS19960 at 4180.980 kb on - strand, within BWI76_RS19960 at 4181.202 kb on - strand, within BWI76_RS19960 at 4181.202 kb on - strand, within BWI76_RS19960 at 4181.531 kb on - strand at 4181.533 kb on + strand at 4181.979 kb on - strand, within BWI76_RS19965 at 4182.000 kb on + strand, within BWI76_RS19965 at 4182.000 kb on + strand, within BWI76_RS19965 at 4182.133 kb on + strand, within BWI76_RS19965 at 4182.133 kb on + strand, within BWI76_RS19965 at 4182.391 kb on - strand, within BWI76_RS19965
Per-strain Table
Position Strand Gene LocusTag Fraction KLEB15 MOI 0.1 remove 4,179,269 - BWI76_RS19955 0.22 -0.3 4,179,346 - BWI76_RS19955 0.29 +0.2 4,179,401 + BWI76_RS19955 0.35 -1.4 4,179,409 - BWI76_RS19955 0.35 +0.1 4,179,461 + BWI76_RS19955 0.40 +0.5 4,179,562 - BWI76_RS19955 0.50 +0.3 4,179,678 - BWI76_RS19955 0.60 +0.1 4,180,070 + -0.5 4,180,636 + BWI76_RS19960 0.39 -0.4 4,180,880 + BWI76_RS19960 0.57 -1.1 4,180,972 + BWI76_RS19960 0.64 -0.3 4,180,980 - BWI76_RS19960 0.65 -0.3 4,181,202 - BWI76_RS19960 0.81 -0.4 4,181,202 - BWI76_RS19960 0.81 -0.6 4,181,531 - +0.3 4,181,533 + -0.3 4,181,979 - BWI76_RS19965 0.15 +0.2 4,182,000 + BWI76_RS19965 0.17 +0.3 4,182,000 + BWI76_RS19965 0.17 -0.1 4,182,133 + BWI76_RS19965 0.25 -0.1 4,182,133 + BWI76_RS19965 0.25 -0.2 4,182,391 - BWI76_RS19965 0.41 -0.2
Or see this region's nucleotide sequence