Experiment: KLEB15 MOI 0.1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS15710 and BWI76_RS15715 are separated by 133 nucleotides BWI76_RS15715 and BWI76_RS15720 overlap by 8 nucleotides BWI76_RS15720 and BWI76_RS15725 overlap by 1 nucleotides BWI76_RS15725 and BWI76_RS15730 are separated by 260 nucleotides BWI76_RS15730 and BWI76_RS15735 overlap by 8 nucleotides
BWI76_RS15710: BWI76_RS15710 - phage antitermination protein Q, at 3,277,897 to 3,278,586
_RS15710
BWI76_RS15715: BWI76_RS15715 - putative ninG protein, at 3,278,720 to 3,279,358
_RS15715
BWI76_RS15720: BWI76_RS15720 - prophage protein NinE, at 3,279,351 to 3,279,521
_RS15720
BWI76_RS15725: BWI76_RS15725 - hypothetical protein, at 3,279,521 to 3,279,976
_RS15725
BWI76_RS15730: BWI76_RS15730 - hypothetical protein, at 3,280,237 to 3,280,467
_RS15730
BWI76_RS15735: BWI76_RS15735 - hypothetical protein, at 3,280,460 to 3,281,005
_RS15735
Position (kb)
3279
3280 Strain fitness (log2 ratio)
-1
0
1 at 3278.372 kb on + strand, within BWI76_RS15710 at 3278.474 kb on - strand, within BWI76_RS15710 at 3278.608 kb on - strand at 3278.656 kb on - strand at 3278.863 kb on - strand, within BWI76_RS15715 at 3279.374 kb on - strand, within BWI76_RS15720 at 3279.448 kb on - strand, within BWI76_RS15720 at 3279.550 kb on - strand at 3279.838 kb on + strand, within BWI76_RS15725 at 3279.846 kb on - strand, within BWI76_RS15725 at 3279.864 kb on + strand, within BWI76_RS15725 at 3279.949 kb on + strand at 3280.350 kb on - strand, within BWI76_RS15730 at 3280.459 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction KLEB15 MOI 0.1 remove 3,278,372 + BWI76_RS15710 0.69 -0.4 3,278,474 - BWI76_RS15710 0.84 -0.4 3,278,608 - -0.3 3,278,656 - -0.7 3,278,863 - BWI76_RS15715 0.22 -0.4 3,279,374 - BWI76_RS15720 0.13 -1.2 3,279,448 - BWI76_RS15720 0.57 -0.2 3,279,550 - -0.2 3,279,838 + BWI76_RS15725 0.70 -1.0 3,279,846 - BWI76_RS15725 0.71 -0.4 3,279,864 + BWI76_RS15725 0.75 -0.2 3,279,949 + -0.9 3,280,350 - BWI76_RS15730 0.49 -0.5 3,280,459 - -0.6
Or see this region's nucleotide sequence