Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS10725

Experiment: KLEB15 MOI 0.1

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS10720 and BWI76_RS10725 are separated by 516 nucleotidesBWI76_RS10725 and BWI76_RS10730 are separated by 139 nucleotides BWI76_RS10720: BWI76_RS10720 - putrescine importer, at 2,265,191 to 2,266,582 _RS10720 BWI76_RS10725: BWI76_RS10725 - hypothetical protein, at 2,267,099 to 2,267,323 _RS10725 BWI76_RS10730: BWI76_RS10730 - bifunctional glucose-1-phosphatase/inositol phosphatase, at 2,267,463 to 2,268,710 _RS10730 Position (kb) 2267 2268Strain fitness (log2 ratio) -2 -1 0 1at 2266.112 kb on - strand, within BWI76_RS10720at 2266.492 kb on - strandat 2266.506 kb on - strandat 2266.551 kb on - strandat 2266.567 kb on + strandat 2266.567 kb on + strandat 2266.570 kb on - strandat 2266.598 kb on + strandat 2266.739 kb on - strandat 2266.776 kb on + strandat 2266.776 kb on + strandat 2267.058 kb on + strandat 2267.064 kb on + strandat 2267.064 kb on + strandat 2267.066 kb on - strandat 2267.148 kb on - strand, within BWI76_RS10725at 2267.264 kb on - strand, within BWI76_RS10725at 2267.502 kb on + strandat 2267.510 kb on - strandat 2267.535 kb on - strandat 2267.592 kb on - strandat 2267.728 kb on - strand, within BWI76_RS10730at 2267.861 kb on - strand, within BWI76_RS10730

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Per-strain Table

Position Strand Gene LocusTag Fraction KLEB15 MOI 0.1
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2,266,112 - BWI76_RS10720 0.66 -0.4
2,266,492 - +1.1
2,266,506 - +0.2
2,266,551 - -1.0
2,266,567 + -0.2
2,266,567 + +0.6
2,266,570 - +1.5
2,266,598 + -0.2
2,266,739 - -2.2
2,266,776 + +0.5
2,266,776 + -1.5
2,267,058 + +0.7
2,267,064 + +0.4
2,267,064 + -0.5
2,267,066 - +0.4
2,267,148 - BWI76_RS10725 0.22 -1.0
2,267,264 - BWI76_RS10725 0.73 -0.2
2,267,502 + -0.2
2,267,510 - -0.3
2,267,535 - +0.4
2,267,592 - -0.1
2,267,728 - BWI76_RS10730 0.21 -0.4
2,267,861 - BWI76_RS10730 0.32 -0.2

Or see this region's nucleotide sequence