Experiment: KLEB15 MOI 1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS18265 and BWI76_RS18270 are separated by 46 nucleotides BWI76_RS18270 and BWI76_RS18275 are separated by 371 nucleotides
BWI76_RS18265: BWI76_RS18265 - MFS transporter, at 3,795,745 to 3,797,307
_RS18265
BWI76_RS18270: BWI76_RS18270 - hypothetical protein, at 3,797,354 to 3,797,605
_RS18270
BWI76_RS18275: BWI76_RS18275 - MFS transporter, at 3,797,977 to 3,799,401
_RS18275
Position (kb)
3797
3798 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 3796.369 kb on - strand, within BWI76_RS18265 at 3796.439 kb on + strand, within BWI76_RS18265 at 3796.442 kb on - strand, within BWI76_RS18265 at 3796.606 kb on + strand, within BWI76_RS18265 at 3796.661 kb on - strand, within BWI76_RS18265 at 3796.731 kb on + strand, within BWI76_RS18265 at 3796.736 kb on + strand, within BWI76_RS18265 at 3796.739 kb on - strand, within BWI76_RS18265 at 3796.739 kb on - strand, within BWI76_RS18265 at 3796.739 kb on - strand, within BWI76_RS18265 at 3796.835 kb on + strand, within BWI76_RS18265 at 3797.154 kb on + strand at 3797.431 kb on + strand, within BWI76_RS18270 at 3797.761 kb on + strand at 3797.922 kb on + strand at 3797.922 kb on + strand at 3797.925 kb on - strand at 3797.925 kb on - strand at 3797.930 kb on - strand at 3797.949 kb on - strand at 3798.093 kb on - strand at 3798.299 kb on - strand, within BWI76_RS18275 at 3798.398 kb on + strand, within BWI76_RS18275 at 3798.403 kb on + strand at 3798.411 kb on - strand, within BWI76_RS18275 at 3798.562 kb on + strand, within BWI76_RS18275 at 3798.570 kb on - strand, within BWI76_RS18275
Per-strain Table
Position Strand Gene LocusTag Fraction KLEB15 MOI 1 remove 3,796,369 - BWI76_RS18265 0.40 -0.7 3,796,439 + BWI76_RS18265 0.44 -0.3 3,796,442 - BWI76_RS18265 0.45 +0.1 3,796,606 + BWI76_RS18265 0.55 +1.1 3,796,661 - BWI76_RS18265 0.59 -0.9 3,796,731 + BWI76_RS18265 0.63 +0.2 3,796,736 + BWI76_RS18265 0.63 +0.4 3,796,739 - BWI76_RS18265 0.64 -1.1 3,796,739 - BWI76_RS18265 0.64 -0.3 3,796,739 - BWI76_RS18265 0.64 -0.2 3,796,835 + BWI76_RS18265 0.70 -0.5 3,797,154 + +0.2 3,797,431 + BWI76_RS18270 0.31 -0.5 3,797,761 + -0.2 3,797,922 + -0.3 3,797,922 + -0.1 3,797,925 - +0.1 3,797,925 - +0.4 3,797,930 - -3.0 3,797,949 - +0.2 3,798,093 - +0.6 3,798,299 - BWI76_RS18275 0.23 +0.3 3,798,398 + BWI76_RS18275 0.30 -0.3 3,798,403 + -0.6 3,798,411 - BWI76_RS18275 0.30 +0.1 3,798,562 + BWI76_RS18275 0.41 +0.3 3,798,570 - BWI76_RS18275 0.42 +0.2
Or see this region's nucleotide sequence