Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS16825
Experiment: KLEB15 MOI 1
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | KLEB15 MOI 1 |
---|---|---|---|---|---|
remove | |||||
3,487,049 | + | BWI76_RS16820 | 0.13 | +0.1 | |
3,487,075 | + | BWI76_RS16820 | 0.16 | +0.4 | |
3,487,353 | - | BWI76_RS16820 | 0.42 | +0.3 | |
3,487,378 | + | BWI76_RS16820 | 0.45 | +0.3 | |
3,487,656 | - | BWI76_RS16820 | 0.71 | -0.1 | |
3,487,656 | - | BWI76_RS16820 | 0.71 | -1.0 | |
3,487,738 | + | BWI76_RS16820 | 0.79 | +0.0 | |
3,488,148 | + | BWI76_RS16825 | 0.19 | +0.5 | |
3,488,253 | - | BWI76_RS16825 | 0.29 | +0.2 | |
3,488,499 | + | BWI76_RS16825 | 0.53 | +0.3 | |
3,488,599 | + | BWI76_RS16825 | 0.63 | +1.8 | |
3,488,607 | - | BWI76_RS16825 | 0.63 | -0.1 | |
3,488,667 | + | BWI76_RS16825 | 0.69 | +0.5 | |
3,489,236 | + | BWI76_RS16830 | 0.31 | +0.3 | |
3,489,349 | + | BWI76_RS16830 | 0.45 | -0.2 | |
3,489,441 | + | BWI76_RS16830 | 0.56 | +0.7 | |
3,489,450 | + | BWI76_RS16830 | 0.57 | -0.9 | |
3,489,461 | + | BWI76_RS16830 | 0.59 | -1.2 |
Or see this region's nucleotide sequence