Experiment: KLEB15 MOI 1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS13355 and BWI76_RS13360 overlap by 21 nucleotides BWI76_RS13360 and BWI76_RS13365 are separated by 192 nucleotides BWI76_RS13365 and BWI76_RS13370 are separated by 94 nucleotides
BWI76_RS13355: BWI76_RS13355 - AraC family transcriptional regulator, at 2,785,578 to 2,786,444
_RS13355
BWI76_RS13360: BWI76_RS13360 - benzoate transporter, at 2,786,424 to 2,787,590
_RS13360
BWI76_RS13365: BWI76_RS13365 - GCN5-like N-acetyltransferase, at 2,787,783 to 2,788,208
_RS13365
BWI76_RS13370: BWI76_RS13370 - hypothetical protein, at 2,788,303 to 2,788,839
_RS13370
Position (kb)
2786
2787
2788 Strain fitness (log2 ratio)
-2
-1
0
1 at 2785.441 kb on - strand at 2785.441 kb on - strand at 2785.533 kb on - strand at 2785.544 kb on + strand at 2785.828 kb on + strand, within BWI76_RS13355 at 2785.912 kb on - strand, within BWI76_RS13355 at 2786.127 kb on - strand, within BWI76_RS13355 at 2786.288 kb on - strand, within BWI76_RS13355 at 2786.535 kb on + strand at 2787.286 kb on - strand, within BWI76_RS13360 at 2787.391 kb on - strand, within BWI76_RS13360 at 2787.440 kb on - strand, within BWI76_RS13360 at 2787.445 kb on - strand, within BWI76_RS13360 at 2787.583 kb on - strand at 2787.791 kb on + strand at 2788.548 kb on + strand, within BWI76_RS13370 at 2788.548 kb on + strand, within BWI76_RS13370
Per-strain Table
Position Strand Gene LocusTag Fraction KLEB15 MOI 1 remove 2,785,441 - -1.1 2,785,441 - +1.3 2,785,533 - +0.9 2,785,544 + +1.0 2,785,828 + BWI76_RS13355 0.29 +0.6 2,785,912 - BWI76_RS13355 0.39 +0.8 2,786,127 - BWI76_RS13355 0.63 -0.3 2,786,288 - BWI76_RS13355 0.82 -0.0 2,786,535 + -0.2 2,787,286 - BWI76_RS13360 0.74 +0.6 2,787,391 - BWI76_RS13360 0.83 +0.7 2,787,440 - BWI76_RS13360 0.87 +0.2 2,787,445 - BWI76_RS13360 0.87 +0.0 2,787,583 - +0.2 2,787,791 + -1.8 2,788,548 + BWI76_RS13370 0.46 -0.4 2,788,548 + BWI76_RS13370 0.46 -0.4
Or see this region's nucleotide sequence