Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS06430
Experiment: KLEB15 MOI 1
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | KLEB15 MOI 1 |
---|---|---|---|---|---|
remove | |||||
1,350,809 | + | BWI76_RS06425 | 0.33 | +0.2 | |
1,350,817 | - | BWI76_RS06425 | 0.34 | +0.2 | |
1,350,995 | - | BWI76_RS06425 | 0.47 | -0.0 | |
1,351,164 | - | BWI76_RS06425 | 0.59 | -0.3 | |
1,351,189 | + | BWI76_RS06425 | 0.60 | +0.1 | |
1,351,290 | + | BWI76_RS06425 | 0.68 | -0.8 | |
1,351,549 | - | BWI76_RS06425 | 0.86 | +0.3 | |
1,351,605 | - | +0.2 | |||
1,351,769 | + | +1.8 | |||
1,351,770 | + | BWI76_RS06430 | 0.16 | +0.0 | |
1,351,778 | - | BWI76_RS06430 | 0.21 | +0.8 | |
1,351,788 | - | BWI76_RS06430 | 0.26 | +0.9 | |
1,351,802 | + | BWI76_RS06430 | 0.34 | +0.9 | |
1,351,802 | + | BWI76_RS06430 | 0.34 | +0.5 | |
1,351,810 | - | BWI76_RS06430 | 0.38 | +0.2 | |
1,351,810 | - | BWI76_RS06430 | 0.38 | +0.0 | |
1,351,810 | - | BWI76_RS06430 | 0.38 | +0.1 | |
1,351,942 | - | -0.7 | |||
1,351,944 | - | -0.6 | |||
1,351,959 | + | +0.5 | |||
1,352,168 | - | -0.3 | |||
1,352,391 | + | BWI76_RS06435 | 0.18 | -1.7 | |
1,352,435 | + | BWI76_RS06435 | 0.21 | +0.1 | |
1,352,564 | - | BWI76_RS06435 | 0.30 | +0.3 |
Or see this region's nucleotide sequence