Experiment: KLEB15 MOI 1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS01505 and BWI76_RS01510 are separated by 409 nucleotides BWI76_RS01510 and BWI76_RS01515 are separated by 37 nucleotides BWI76_RS01515 and BWI76_RS01520 are separated by 3 nucleotides BWI76_RS01520 and BWI76_RS01525 are separated by 172 nucleotides
BWI76_RS01505: BWI76_RS01505 - DNA-directed RNA polymerase subunit beta', at 303,893 to 308,116
_RS01505
BWI76_RS01510: BWI76_RS01510 - anaerobic C4-dicarboxylate transporter, at 308,526 to 309,866
_RS01510
BWI76_RS01515: BWI76_RS01515 - PTS family cellobiose transporter subunit IIA, at 309,904 to 310,221
_RS01515
BWI76_RS01520: BWI76_RS01520 - PTS sugar transporter subunit IIB, at 310,225 to 310,530
_RS01520
BWI76_RS01525: BWI76_RS01525 - sensor domain-containing diguanylate cyclase, at 310,703 to 312,235
_RS01525
Position (kb) 308
309
310 Strain fitness (log2 ratio) -1
0
1
2 at 308.068 kb on + strand at 308.157 kb on - strand at 308.264 kb on - strand at 308.361 kb on - strand at 308.395 kb on + strand at 308.410 kb on + strand at 308.410 kb on + strand at 308.418 kb on + strand at 308.418 kb on - strand at 308.420 kb on + strand at 308.420 kb on + strand at 308.420 kb on + strand at 308.420 kb on + strand at 308.420 kb on + strand at 308.420 kb on + strand at 308.420 kb on + strand at 308.420 kb on + strand at 308.420 kb on + strand at 308.428 kb on - strand at 308.428 kb on - strand at 308.428 kb on - strand at 308.428 kb on - strand at 308.431 kb on + strand at 308.431 kb on + strand at 308.431 kb on + strand at 308.431 kb on + strand at 308.432 kb on + strand at 308.433 kb on - strand at 308.439 kb on - strand at 308.439 kb on - strand at 308.439 kb on - strand at 308.462 kb on - strand at 308.488 kb on + strand at 308.496 kb on - strand at 308.511 kb on + strand at 308.512 kb on + strand at 308.512 kb on + strand at 308.512 kb on + strand at 308.512 kb on + strand at 308.520 kb on - strand at 308.567 kb on + strand at 308.567 kb on + strand at 308.567 kb on + strand at 308.567 kb on + strand at 308.567 kb on + strand at 308.567 kb on + strand at 308.567 kb on + strand at 308.567 kb on + strand at 308.567 kb on + strand at 308.575 kb on - strand at 308.575 kb on - strand at 308.575 kb on - strand at 308.575 kb on - strand at 308.575 kb on - strand at 308.575 kb on - strand at 308.575 kb on - strand at 308.590 kb on + strand at 308.590 kb on + strand at 308.590 kb on + strand at 308.590 kb on + strand at 308.590 kb on + strand at 308.590 kb on + strand at 308.590 kb on + strand at 308.598 kb on - strand at 308.598 kb on - strand at 308.614 kb on + strand at 308.622 kb on - strand at 308.627 kb on - strand at 308.627 kb on - strand at 308.700 kb on - strand, within BWI76_RS01510 at 308.710 kb on + strand, within BWI76_RS01510 at 308.734 kb on + strand, within BWI76_RS01510 at 308.735 kb on + strand, within BWI76_RS01510 at 308.741 kb on - strand, within BWI76_RS01510 at 308.742 kb on - strand, within BWI76_RS01510 at 308.742 kb on - strand, within BWI76_RS01510 at 308.742 kb on - strand, within BWI76_RS01510 at 308.742 kb on - strand, within BWI76_RS01510 at 308.744 kb on + strand, within BWI76_RS01510 at 308.815 kb on + strand, within BWI76_RS01510 at 308.823 kb on - strand, within BWI76_RS01510 at 308.861 kb on - strand, within BWI76_RS01510 at 308.861 kb on - strand, within BWI76_RS01510 at 308.861 kb on - strand, within BWI76_RS01510 at 308.865 kb on - strand, within BWI76_RS01510 at 308.923 kb on - strand, within BWI76_RS01510 at 308.946 kb on - strand, within BWI76_RS01510 at 308.953 kb on - strand, within BWI76_RS01510 at 308.983 kb on + strand, within BWI76_RS01510 at 309.007 kb on + strand, within BWI76_RS01510 at 309.060 kb on + strand, within BWI76_RS01510 at 309.224 kb on - strand, within BWI76_RS01510 at 309.324 kb on - strand, within BWI76_RS01510 at 309.517 kb on - strand, within BWI76_RS01510 at 309.553 kb on - strand, within BWI76_RS01510 at 309.559 kb on - strand, within BWI76_RS01510 at 309.747 kb on + strand at 309.976 kb on + strand, within BWI76_RS01515 at 309.981 kb on + strand, within BWI76_RS01515 at 310.030 kb on + strand, within BWI76_RS01515 at 310.030 kb on + strand, within BWI76_RS01515 at 310.038 kb on - strand, within BWI76_RS01515 at 310.178 kb on + strand, within BWI76_RS01515 at 310.237 kb on + strand at 310.325 kb on + strand, within BWI76_RS01520 at 310.325 kb on + strand, within BWI76_RS01520 at 310.325 kb on + strand, within BWI76_RS01520 at 310.325 kb on + strand, within BWI76_RS01520 at 310.333 kb on - strand, within BWI76_RS01520 at 310.359 kb on + strand, within BWI76_RS01520 at 310.518 kb on - strand at 310.548 kb on - strand at 310.616 kb on - strand at 310.695 kb on - strand at 310.810 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction KLEB15 MOI 1 remove 308,068 + -0.6 308,157 - -0.8 308,264 - -0.2 308,361 - -0.3 308,395 + +1.9 308,410 + +1.2 308,410 + +0.4 308,418 + +0.2 308,418 - -0.5 308,420 + -0.9 308,420 + +0.6 308,420 + +0.6 308,420 + +0.2 308,420 + -0.3 308,420 + +0.4 308,420 + -0.1 308,420 + -0.1 308,420 + -0.6 308,428 - +0.7 308,428 - +0.0 308,428 - +0.3 308,428 - -0.1 308,431 + +0.6 308,431 + +0.3 308,431 + -0.0 308,431 + -0.4 308,432 + +0.2 308,433 - -0.6 308,439 - -0.0 308,439 - -0.3 308,439 - +0.3 308,462 - +0.3 308,488 + +1.0 308,496 - +0.3 308,511 + +0.5 308,512 + -0.9 308,512 + +0.1 308,512 + -0.2 308,512 + +0.3 308,520 - +0.1 308,567 + -0.1 308,567 + +0.2 308,567 + -0.1 308,567 + +0.2 308,567 + +0.1 308,567 + +0.4 308,567 + -0.0 308,567 + +0.1 308,567 + +0.2 308,575 - +0.3 308,575 - +1.4 308,575 - -0.8 308,575 - +1.6 308,575 - +0.1 308,575 - +0.2 308,575 - +0.1 308,590 + +0.2 308,590 + +0.3 308,590 + +0.2 308,590 + -0.3 308,590 + -0.2 308,590 + -0.1 308,590 + -0.1 308,598 - +0.4 308,598 - +0.4 308,614 + +0.5 308,622 - -1.1 308,627 - +0.1 308,627 - -0.3 308,700 - BWI76_RS01510 0.13 +1.3 308,710 + BWI76_RS01510 0.14 -0.3 308,734 + BWI76_RS01510 0.16 +0.4 308,735 + BWI76_RS01510 0.16 +0.3 308,741 - BWI76_RS01510 0.16 -0.0 308,742 - BWI76_RS01510 0.16 +0.4 308,742 - BWI76_RS01510 0.16 +0.5 308,742 - BWI76_RS01510 0.16 +0.2 308,742 - BWI76_RS01510 0.16 +0.4 308,744 + BWI76_RS01510 0.16 +0.1 308,815 + BWI76_RS01510 0.22 +0.4 308,823 - BWI76_RS01510 0.22 -0.2 308,861 - BWI76_RS01510 0.25 -0.2 308,861 - BWI76_RS01510 0.25 +1.2 308,861 - BWI76_RS01510 0.25 -0.5 308,865 - BWI76_RS01510 0.25 +0.5 308,923 - BWI76_RS01510 0.30 +0.3 308,946 - BWI76_RS01510 0.31 +0.7 308,953 - BWI76_RS01510 0.32 +0.4 308,983 + BWI76_RS01510 0.34 +0.8 309,007 + BWI76_RS01510 0.36 +0.0 309,060 + BWI76_RS01510 0.40 -0.0 309,224 - BWI76_RS01510 0.52 +0.3 309,324 - BWI76_RS01510 0.60 +0.2 309,517 - BWI76_RS01510 0.74 -0.3 309,553 - BWI76_RS01510 0.77 +1.6 309,559 - BWI76_RS01510 0.77 +0.0 309,747 + -0.1 309,976 + BWI76_RS01515 0.23 +0.1 309,981 + BWI76_RS01515 0.24 -0.3 310,030 + BWI76_RS01515 0.40 -1.6 310,030 + BWI76_RS01515 0.40 -0.0 310,038 - BWI76_RS01515 0.42 +0.4 310,178 + BWI76_RS01515 0.86 +0.5 310,237 + +1.2 310,325 + BWI76_RS01520 0.33 +0.4 310,325 + BWI76_RS01520 0.33 +0.6 310,325 + BWI76_RS01520 0.33 +0.1 310,325 + BWI76_RS01520 0.33 -0.4 310,333 - BWI76_RS01520 0.35 +0.3 310,359 + BWI76_RS01520 0.44 +0.1 310,518 - +0.6 310,548 - -0.1 310,616 - +0.3 310,695 - +0.4 310,810 - -0.6
Or see this region's nucleotide sequence