Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS11565

Experiment: No phage control

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS11560 and BWI76_RS11565 are separated by 136 nucleotidesBWI76_RS11565 and BWI76_RS11570 are separated by 142 nucleotides BWI76_RS11560: BWI76_RS11560 - oxidoreductase, at 2,431,998 to 2,432,981 _RS11560 BWI76_RS11565: BWI76_RS11565 - DeoR family transcriptional regulator, at 2,433,118 to 2,433,876 _RS11565 BWI76_RS11570: BWI76_RS11570 - MFS transporter, at 2,434,019 to 2,435,374 _RS11570 Position (kb) 2433 2434Strain fitness (log2 ratio) -2 -1 0 1 2at 2432.156 kb on - strandat 2432.285 kb on + strand, within BWI76_RS11560at 2432.368 kb on + strand, within BWI76_RS11560at 2432.535 kb on + strand, within BWI76_RS11560at 2432.596 kb on + strand, within BWI76_RS11560at 2432.614 kb on + strand, within BWI76_RS11560at 2432.659 kb on + strand, within BWI76_RS11560at 2432.667 kb on - strand, within BWI76_RS11560at 2432.864 kb on - strand, within BWI76_RS11560at 2432.974 kb on + strandat 2432.974 kb on - strandat 2432.985 kb on + strandat 2433.109 kb on + strandat 2433.243 kb on + strand, within BWI76_RS11565at 2433.250 kb on + strand, within BWI76_RS11565at 2433.286 kb on + strand, within BWI76_RS11565at 2433.286 kb on + strand, within BWI76_RS11565at 2433.286 kb on + strand, within BWI76_RS11565at 2433.286 kb on + strand, within BWI76_RS11565at 2433.286 kb on + strand, within BWI76_RS11565at 2433.331 kb on + strand, within BWI76_RS11565at 2433.415 kb on + strand, within BWI76_RS11565at 2433.417 kb on + strand, within BWI76_RS11565at 2433.425 kb on + strand, within BWI76_RS11565at 2433.475 kb on + strand, within BWI76_RS11565at 2433.480 kb on + strand, within BWI76_RS11565at 2433.490 kb on + strandat 2433.500 kb on + strand, within BWI76_RS11565at 2433.542 kb on + strand, within BWI76_RS11565at 2433.625 kb on + strand, within BWI76_RS11565at 2433.632 kb on + strand, within BWI76_RS11565at 2433.632 kb on + strand, within BWI76_RS11565at 2433.640 kb on + strand, within BWI76_RS11565at 2433.640 kb on + strand, within BWI76_RS11565at 2433.649 kb on + strand, within BWI76_RS11565at 2433.649 kb on + strand, within BWI76_RS11565at 2433.656 kb on + strand, within BWI76_RS11565at 2433.661 kb on + strand, within BWI76_RS11565at 2433.666 kb on + strand, within BWI76_RS11565at 2433.667 kb on + strand, within BWI76_RS11565at 2433.668 kb on + strand, within BWI76_RS11565at 2433.735 kb on + strand, within BWI76_RS11565at 2433.756 kb on + strand, within BWI76_RS11565at 2433.763 kb on + strand, within BWI76_RS11565at 2433.763 kb on + strand, within BWI76_RS11565at 2433.816 kb on + strandat 2433.824 kb on + strandat 2433.828 kb on + strandat 2433.833 kb on + strandat 2433.918 kb on + strandat 2433.987 kb on - strandat 2434.022 kb on + strandat 2434.025 kb on - strandat 2434.027 kb on + strandat 2434.034 kb on - strandat 2434.034 kb on - strandat 2434.035 kb on - strandat 2434.054 kb on - strandat 2434.063 kb on - strandat 2434.063 kb on - strandat 2434.063 kb on - strandat 2434.176 kb on + strand, within BWI76_RS11570at 2434.199 kb on + strand, within BWI76_RS11570at 2434.206 kb on + strand, within BWI76_RS11570at 2434.206 kb on + strand, within BWI76_RS11570at 2434.206 kb on + strand, within BWI76_RS11570at 2434.211 kb on + strand, within BWI76_RS11570at 2434.211 kb on + strand, within BWI76_RS11570at 2434.211 kb on + strand, within BWI76_RS11570at 2434.211 kb on + strand, within BWI76_RS11570at 2434.211 kb on + strand, within BWI76_RS11570at 2434.211 kb on + strand, within BWI76_RS11570at 2434.211 kb on + strand, within BWI76_RS11570at 2434.211 kb on + strand, within BWI76_RS11570at 2434.211 kb on + strand, within BWI76_RS11570at 2434.214 kb on - strand, within BWI76_RS11570at 2434.214 kb on - strand, within BWI76_RS11570at 2434.219 kb on - strand, within BWI76_RS11570at 2434.219 kb on - strand, within BWI76_RS11570at 2434.371 kb on + strand, within BWI76_RS11570at 2434.373 kb on + strand, within BWI76_RS11570at 2434.386 kb on + strand, within BWI76_RS11570at 2434.515 kb on + strand, within BWI76_RS11570at 2434.579 kb on + strand, within BWI76_RS11570at 2434.584 kb on - strand, within BWI76_RS11570at 2434.744 kb on + strand, within BWI76_RS11570at 2434.811 kb on - strand, within BWI76_RS11570at 2434.815 kb on + strand, within BWI76_RS11570

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Per-strain Table

Position Strand Gene LocusTag Fraction No phage control
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2,432,156 - +0.9
2,432,285 + BWI76_RS11560 0.29 -0.1
2,432,368 + BWI76_RS11560 0.38 -0.3
2,432,535 + BWI76_RS11560 0.55 +0.2
2,432,596 + BWI76_RS11560 0.61 +0.7
2,432,614 + BWI76_RS11560 0.63 -0.0
2,432,659 + BWI76_RS11560 0.67 +0.1
2,432,667 - BWI76_RS11560 0.68 -0.1
2,432,864 - BWI76_RS11560 0.88 +0.4
2,432,974 + +0.5
2,432,974 - +0.4
2,432,985 + +0.1
2,433,109 + -0.1
2,433,243 + BWI76_RS11565 0.16 -0.3
2,433,250 + BWI76_RS11565 0.17 -0.5
2,433,286 + BWI76_RS11565 0.22 -1.0
2,433,286 + BWI76_RS11565 0.22 +0.1
2,433,286 + BWI76_RS11565 0.22 -0.6
2,433,286 + BWI76_RS11565 0.22 -0.6
2,433,286 + BWI76_RS11565 0.22 -0.7
2,433,331 + BWI76_RS11565 0.28 -0.3
2,433,415 + BWI76_RS11565 0.39 -0.2
2,433,417 + BWI76_RS11565 0.39 -0.3
2,433,425 + BWI76_RS11565 0.40 -0.3
2,433,475 + BWI76_RS11565 0.47 -0.9
2,433,480 + BWI76_RS11565 0.48 -0.2
2,433,490 + -1.3
2,433,500 + BWI76_RS11565 0.50 -1.6
2,433,542 + BWI76_RS11565 0.56 -0.7
2,433,625 + BWI76_RS11565 0.67 +0.1
2,433,632 + BWI76_RS11565 0.68 +1.3
2,433,632 + BWI76_RS11565 0.68 -0.7
2,433,640 + BWI76_RS11565 0.69 +0.0
2,433,640 + BWI76_RS11565 0.69 -1.3
2,433,649 + BWI76_RS11565 0.70 -1.0
2,433,649 + BWI76_RS11565 0.70 -0.2
2,433,656 + BWI76_RS11565 0.71 -2.3
2,433,661 + BWI76_RS11565 0.72 +1.4
2,433,666 + BWI76_RS11565 0.72 -0.4
2,433,667 + BWI76_RS11565 0.72 +0.5
2,433,668 + BWI76_RS11565 0.72 -0.1
2,433,735 + BWI76_RS11565 0.81 -0.4
2,433,756 + BWI76_RS11565 0.84 -0.6
2,433,763 + BWI76_RS11565 0.85 +0.2
2,433,763 + BWI76_RS11565 0.85 -1.1
2,433,816 + -0.7
2,433,824 + -0.8
2,433,828 + -0.5
2,433,833 + -0.3
2,433,918 + -0.6
2,433,987 - -0.1
2,434,022 + -1.2
2,434,025 - +0.3
2,434,027 + -0.4
2,434,034 - +0.1
2,434,034 - -0.4
2,434,035 - +1.3
2,434,054 - -0.7
2,434,063 - +0.6
2,434,063 - -0.3
2,434,063 - -0.3
2,434,176 + BWI76_RS11570 0.12 -0.5
2,434,199 + BWI76_RS11570 0.13 +0.3
2,434,206 + BWI76_RS11570 0.14 +0.7
2,434,206 + BWI76_RS11570 0.14 +0.3
2,434,206 + BWI76_RS11570 0.14 +0.3
2,434,211 + BWI76_RS11570 0.14 +0.3
2,434,211 + BWI76_RS11570 0.14 -0.3
2,434,211 + BWI76_RS11570 0.14 -0.4
2,434,211 + BWI76_RS11570 0.14 -0.7
2,434,211 + BWI76_RS11570 0.14 -0.1
2,434,211 + BWI76_RS11570 0.14 -0.6
2,434,211 + BWI76_RS11570 0.14 +0.1
2,434,211 + BWI76_RS11570 0.14 -0.6
2,434,211 + BWI76_RS11570 0.14 -0.1
2,434,214 - BWI76_RS11570 0.14 -0.8
2,434,214 - BWI76_RS11570 0.14 +0.2
2,434,219 - BWI76_RS11570 0.15 -0.4
2,434,219 - BWI76_RS11570 0.15 -1.0
2,434,371 + BWI76_RS11570 0.26 +0.8
2,434,373 + BWI76_RS11570 0.26 +0.2
2,434,386 + BWI76_RS11570 0.27 -0.2
2,434,515 + BWI76_RS11570 0.37 +0.2
2,434,579 + BWI76_RS11570 0.41 +0.3
2,434,584 - BWI76_RS11570 0.42 +2.6
2,434,744 + BWI76_RS11570 0.53 +0.3
2,434,811 - BWI76_RS11570 0.58 +0.2
2,434,815 + BWI76_RS11570 0.59 -0.3

Or see this region's nucleotide sequence