Experiment: K. M5a1 KLEB10 MOI 1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS24920 and BWI76_RS24925 are separated by 22 nucleotides BWI76_RS24925 and BWI76_RS24930 are separated by 9 nucleotides BWI76_RS24930 and BWI76_RS24935 are separated by 207 nucleotides
BWI76_RS24915: BWI76_RS24915 - penicillin-binding protein activator, at 5,191,438 to 5,193,519
_RS24915
BWI76_RS24920: BWI76_RS24920 - YraN family protein, at 5,193,477 to 5,193,863
_RS24920
BWI76_RS24925: BWI76_RS24925 - DnaA initiator-associating protein DiaA, at 5,193,886 to 5,194,476
_RS24925
BWI76_RS24930: BWI76_RS24930 - osmotically-inducible protein OsmY, at 5,194,486 to 5,195,061
_RS24930
BWI76_RS24935: BWI76_RS24935 - hypothetical protein, at 5,195,269 to 5,196,309
_RS24935
Position (kb) 5194
5195
5196 Strain fitness (log2 ratio) -2
-1
0
1 at 5193.636 kb on + strand, within BWI76_RS24920 at 5193.745 kb on - strand, within BWI76_RS24920 at 5193.807 kb on + strand, within BWI76_RS24920 at 5194.007 kb on - strand, within BWI76_RS24925 at 5194.186 kb on + strand, within BWI76_RS24925 at 5194.314 kb on - strand, within BWI76_RS24925 at 5194.493 kb on - strand at 5194.610 kb on + strand, within BWI76_RS24930 at 5194.610 kb on + strand, within BWI76_RS24930 at 5194.722 kb on - strand, within BWI76_RS24930 at 5194.745 kb on - strand, within BWI76_RS24930 at 5194.847 kb on - strand, within BWI76_RS24930 at 5194.878 kb on + strand, within BWI76_RS24930 at 5194.901 kb on - strand, within BWI76_RS24930 at 5194.953 kb on + strand, within BWI76_RS24930 at 5194.961 kb on - strand, within BWI76_RS24930 at 5195.081 kb on + strand at 5195.393 kb on - strand, within BWI76_RS24935 at 5195.516 kb on + strand, within BWI76_RS24935 at 5195.516 kb on + strand, within BWI76_RS24935 at 5195.528 kb on + strand, within BWI76_RS24935 at 5195.803 kb on + strand, within BWI76_RS24935 at 5195.811 kb on - strand, within BWI76_RS24935 at 5195.857 kb on - strand, within BWI76_RS24935 at 5195.971 kb on - strand, within BWI76_RS24935 at 5195.994 kb on + strand, within BWI76_RS24935
Per-strain Table
Position Strand Gene LocusTag Fraction K. M5a1 KLEB10 MOI 1 remove 5,193,636 + BWI76_RS24920 0.41 -0.6 5,193,745 - BWI76_RS24920 0.69 -2.5 5,193,807 + BWI76_RS24920 0.85 +0.1 5,194,007 - BWI76_RS24925 0.20 -2.3 5,194,186 + BWI76_RS24925 0.51 +0.1 5,194,314 - BWI76_RS24925 0.72 -1.3 5,194,493 - +0.0 5,194,610 + BWI76_RS24930 0.22 -1.2 5,194,610 + BWI76_RS24930 0.22 -2.0 5,194,722 - BWI76_RS24930 0.41 -0.2 5,194,745 - BWI76_RS24930 0.45 -2.4 5,194,847 - BWI76_RS24930 0.63 -1.9 5,194,878 + BWI76_RS24930 0.68 -1.4 5,194,901 - BWI76_RS24930 0.72 -0.1 5,194,953 + BWI76_RS24930 0.81 -0.1 5,194,961 - BWI76_RS24930 0.82 -0.4 5,195,081 + +0.6 5,195,393 - BWI76_RS24935 0.12 -0.9 5,195,516 + BWI76_RS24935 0.24 -0.9 5,195,516 + BWI76_RS24935 0.24 +0.2 5,195,528 + BWI76_RS24935 0.25 -0.1 5,195,803 + BWI76_RS24935 0.51 -2.1 5,195,811 - BWI76_RS24935 0.52 -2.0 5,195,857 - BWI76_RS24935 0.56 +0.5 5,195,971 - BWI76_RS24935 0.67 +0.7 5,195,994 + BWI76_RS24935 0.70 -0.4
Or see this region's nucleotide sequence