Experiment: K. M5a1 KLEB10 MOI 1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS14670 and BWI76_RS14675 overlap by 86 nucleotides BWI76_RS14675 and BWI76_RS14680 are separated by 12 nucleotides BWI76_RS14680 and BWI76_RS14685 overlap by 1 nucleotides BWI76_RS14685 and BWI76_RS14690 are separated by 32 nucleotides
BWI76_RS14670: BWI76_RS14670 - hypothetical protein, at 3,081,092 to 3,081,697
_RS14670
BWI76_RS14675: BWI76_RS14675 - fimbrial chaperone YfcS, at 3,081,612 to 3,082,364
_RS14675
BWI76_RS14680: BWI76_RS14680 - SefF, at 3,082,377 to 3,082,901
_RS14680
BWI76_RS14685: BWI76_RS14685 - fimbrial protein, at 3,082,901 to 3,083,494
_RS14685
BWI76_RS14690: BWI76_RS14690 - SefD, at 3,083,527 to 3,084,261
_RS14690
Position (kb)
3082
3083 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 3081.736 kb on - strand, within BWI76_RS14675 at 3081.752 kb on - strand, within BWI76_RS14675 at 3081.752 kb on - strand, within BWI76_RS14675 at 3081.865 kb on + strand, within BWI76_RS14675 at 3081.935 kb on + strand at 3082.639 kb on - strand, within BWI76_RS14680 at 3082.708 kb on - strand, within BWI76_RS14680 at 3082.828 kb on - strand, within BWI76_RS14680 at 3082.871 kb on + strand at 3082.924 kb on + strand at 3083.280 kb on + strand, within BWI76_RS14685 at 3083.512 kb on - strand at 3083.712 kb on + strand, within BWI76_RS14690 at 3083.894 kb on - strand, within BWI76_RS14690
Per-strain Table
Position Strand Gene LocusTag Fraction K. M5a1 KLEB10 MOI 1 remove 3,081,736 - BWI76_RS14675 0.16 -1.9 3,081,752 - BWI76_RS14675 0.19 -0.1 3,081,752 - BWI76_RS14675 0.19 -0.0 3,081,865 + BWI76_RS14675 0.34 -1.6 3,081,935 + +1.1 3,082,639 - BWI76_RS14680 0.50 -1.4 3,082,708 - BWI76_RS14680 0.63 -1.3 3,082,828 - BWI76_RS14680 0.86 +2.8 3,082,871 + -0.1 3,082,924 + -0.2 3,083,280 + BWI76_RS14685 0.64 -1.5 3,083,512 - -0.3 3,083,712 + BWI76_RS14690 0.25 +1.3 3,083,894 - BWI76_RS14690 0.50 -0.1
Or see this region's nucleotide sequence