Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS12995

Experiment: K. M5a1 KLEB10 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	K. M5a1 KLEB10 MOI 1
2,709,579	+		BWI76_RS12990	0.68	-0.3
2,709,579	+		BWI76_RS12990	0.68	-1.4
2,709,587	-		BWI76_RS12990	0.70	-0.6
2,709,601	-		BWI76_RS12990	0.71	-1.8
2,709,696	-		BWI76_RS12990	0.84	+0.0
2,709,699	+		BWI76_RS12990	0.84	-0.4
2,709,721	+				+2.5
2,709,721	+		BWI76_RS12990	0.87	-1.1
2,709,721	+		BWI76_RS12990	0.87	-3.6
2,709,722	-		BWI76_RS12990	0.87	+1.4
2,709,735	-		BWI76_RS12990	0.89	-0.3
2,709,757	+				+0.6
2,709,796	-				+0.9
2,709,836	+				+0.7
2,709,836	+				+1.9
2,709,836	+				-1.9
2,709,836	+				+0.1
2,709,844	-				+0.7
2,709,849	-				+0.3
2,709,870	+				+0.1
2,709,878	-				+1.9
2,709,897	-				-2.7
2,709,897	-				+2.5
2,709,915	+				-0.1
2,709,923	-				+0.7
2,709,924	-				+0.4
2,709,924	-				-0.1
2,709,941	-				-1.4
2,709,953	-				-1.5
2,709,953	-				+0.5
2,709,953	-				-2.3
2,709,953	-				+0.4
2,709,953	-				-0.2
2,709,953	-				-0.9
2,709,990	-				-0.4
2,710,072	+				+0.4
2,710,072	+				-0.4
2,710,082	-				+0.2
2,710,082	-				-0.2
2,710,082	-				-2.9
2,710,082	-				+0.2
2,710,230	+				+1.3
2,710,230	+				+0.1
2,710,230	+				-1.3
2,710,238	-				-2.9
2,710,253	-				-0.4
2,710,254	+				-0.6
2,710,273	-				-0.4
2,710,312	+				+1.2
2,710,317	+				-1.3
2,710,318	+				+2.4
2,710,338	+				-0.6
2,710,339	-				-0.2
2,710,339	-				+0.7
2,710,339	-				-0.7
2,710,340	-				+0.2
2,710,351	-				+1.1
2,710,359	-				-2.7
2,710,367	+				-3.4
2,710,367	+				+0.0
2,710,382	-				-1.8
2,710,413	+				+0.7
2,710,428	-				+0.1
2,710,428	-				+0.5
2,710,443	-				-0.1
2,710,455	+				-1.1
2,710,455	+				+1.2
2,710,463	-				+0.3
2,710,463	-				-0.5
2,710,465	-				+1.3
2,710,476	+				-0.7
2,710,476	+				+0.2
2,710,476	+				-1.0
2,710,484	-				+0.1
2,710,533	-		BWI76_RS12995	0.13	+0.1
2,710,740	+		BWI76_RS12995	0.35	-1.3
2,710,740	+		BWI76_RS12995	0.35	-0.4
2,710,740	+		BWI76_RS12995	0.35	-0.6
2,710,783	-		BWI76_RS12995	0.39	-0.9
2,710,790	-		BWI76_RS12995	0.40	-2.0
2,710,886	+		BWI76_RS12995	0.50	-0.3
2,710,902	-		BWI76_RS12995	0.51	-2.2
2,710,907	-		BWI76_RS12995	0.52	-0.1
2,710,940	+		BWI76_RS12995	0.55	-1.6
2,710,940	+		BWI76_RS12995	0.55	-0.9
2,710,948	-		BWI76_RS12995	0.56	-0.1
2,710,948	-		BWI76_RS12995	0.56	-0.1
2,710,948	-		BWI76_RS12995	0.56	-2.5
2,710,948	-				+0.3
2,710,948	-		BWI76_RS12995	0.56	-0.4
2,710,948	-		BWI76_RS12995	0.56	-1.0
2,711,018	+		BWI76_RS12995	0.63	-0.2
2,711,028	+		BWI76_RS12995	0.64	-1.4
2,711,118	+		BWI76_RS12995	0.74	-1.1
2,711,118	+		BWI76_RS12995	0.74	-2.3
2,711,126	-		BWI76_RS12995	0.75	-0.6
2,711,164	+		BWI76_RS12995	0.78	-0.6
2,711,164	+		BWI76_RS12995	0.78	-2.6
2,711,164	+		BWI76_RS12995	0.78	+0.3
2,711,172	-		BWI76_RS12995	0.79	-0.5
2,711,185	+		BWI76_RS12995	0.81	+0.6
2,711,207	+				+0.1
2,711,218	+		BWI76_RS12995	0.84	+0.8
2,711,235	+		BWI76_RS12995	0.86	+1.2
2,711,241	+		BWI76_RS12995	0.86	-2.9
2,711,283	+				+0.3
2,711,286	+				+1.9
2,711,295	-				-1.0
2,711,295	-				+3.3
2,711,336	+				+1.2
2,711,376	+				-0.1
2,711,401	-				+0.4
2,711,407	-				-0.5
2,711,408	-				-1.8
2,711,485	-				-0.7
2,711,499	+				-0.5
2,711,499	+				-0.5
2,711,507	-				+0.9
2,711,507	-				-1.7
2,711,526	+				-0.3
2,711,542	+				+0.2
2,711,543	+				+0.2
2,711,582	+				+0.4
2,711,601	+				+0.9
2,711,601	+				-1.9
2,711,631	-				+1.4
2,711,635	+				+0.4
2,711,664	+				-1.1
2,711,676	-				-0.5
2,711,676	-				-0.2
2,711,778	-		BWI76_RS13000	0.17	-0.3
2,711,794	-		BWI76_RS13000	0.19	-0.3
2,711,796	+		BWI76_RS13000	0.20	-0.3
2,711,796	+		BWI76_RS13000	0.20	-0.2
2,711,891	-		BWI76_RS13000	0.32	-0.8
2,711,898	-		BWI76_RS13000	0.32	-0.3
2,711,954	+		BWI76_RS13000	0.39	-0.6
2,712,277	-		BWI76_RS13000	0.80	+0.1
2,712,318	-		BWI76_RS13000	0.85	-2.3
2,712,346	+		BWI76_RS13000	0.88	-0.6
2,712,354	-		BWI76_RS13000	0.89	+0.7