Experiment: K. M5a1 KLEB10 MOI 1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS02475 and BWI76_RS02480 are separated by 94 nucleotides BWI76_RS02480 and BWI76_RS02485 are separated by 41 nucleotides BWI76_RS02485 and BWI76_RS02490 are separated by 286 nucleotides BWI76_RS02490 and BWI76_RS02495 are separated by 23 nucleotides BWI76_RS02495 and BWI76_RS02500 are separated by 24 nucleotides BWI76_RS02500 and BWI76_RS02505 are separated by 270 nucleotides
BWI76_RS02475: BWI76_RS02475 - ribosome small subunit-dependent GTPase, at 509,237 to 510,298
_RS02475
BWI76_RS02480: BWI76_RS02480 - oligoribonuclease, at 510,393 to 510,938
_RS02480
BWI76_RS02485: BWI76_RS02485 - polar amino acid ABC transporter (PAAT) family, periplasmic amino acid-binding protein, at 510,980 to 511,711
_RS02485
BWI76_RS02490: BWI76_RS02490 - tRNA-Gly, at 511,998 to 512,073
_RS02490
BWI76_RS02495: BWI76_RS02495 - tRNA-Gly, at 512,097 to 512,172
_RS02495
BWI76_RS02500: BWI76_RS02500 - tRNA-Gly, at 512,197 to 512,272
_RS02500
BWI76_RS02505: BWI76_RS02505 - tRNA epoxyqueuosine(34) reductase QueG, at 512,543 to 513,682
_RS02505
Position (kb) 510
511
512 Strain fitness (log2 ratio) -1
0
1 at 510.951 kb on + strand at 511.044 kb on + strand at 511.044 kb on + strand at 511.152 kb on + strand, within BWI76_RS02485 at 511.186 kb on - strand, within BWI76_RS02485 at 511.349 kb on + strand, within BWI76_RS02485 at 511.357 kb on - strand, within BWI76_RS02485 at 511.388 kb on - strand, within BWI76_RS02485 at 511.481 kb on + strand, within BWI76_RS02485 at 511.488 kb on + strand, within BWI76_RS02485 at 511.550 kb on - strand, within BWI76_RS02485 at 511.559 kb on + strand, within BWI76_RS02485 at 512.582 kb on - strand at 512.584 kb on + strand at 512.689 kb on - strand, within BWI76_RS02505
Per-strain Table
Position Strand Gene LocusTag Fraction K. M5a1 KLEB10 MOI 1 remove 510,951 + -0.5 511,044 + +0.2 511,044 + -0.5 511,152 + BWI76_RS02485 0.23 -0.6 511,186 - BWI76_RS02485 0.28 -0.2 511,349 + BWI76_RS02485 0.50 +0.5 511,357 - BWI76_RS02485 0.52 -0.0 511,388 - BWI76_RS02485 0.56 -1.4 511,481 + BWI76_RS02485 0.68 -0.8 511,488 + BWI76_RS02485 0.69 -0.3 511,550 - BWI76_RS02485 0.78 -1.2 511,559 + BWI76_RS02485 0.79 -0.8 512,582 - +0.0 512,584 + +0.5 512,689 - BWI76_RS02505 0.13 -0.0
Or see this region's nucleotide sequence