Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS17285
Experiment: K. M5a1 KLEB10 MOI 1
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | K. M5a1 KLEB10 MOI 1 |
---|---|---|---|---|---|
remove | |||||
3,580,977 | - | -0.5 | |||
3,581,020 | + | +0.3 | |||
3,581,114 | - | BWI76_RS17280 | 0.19 | -0.5 | |
3,581,423 | + | BWI76_RS17280 | 0.53 | -0.4 | |
3,581,423 | + | BWI76_RS17280 | 0.53 | +0.7 | |
3,581,581 | - | BWI76_RS17280 | 0.70 | +0.3 | |
3,581,997 | - | -0.3 | |||
3,582,047 | + | BWI76_RS17285 | 0.19 | -1.4 | |
3,582,105 | + | BWI76_RS17285 | 0.32 | -0.9 | |
3,582,151 | + | BWI76_RS17285 | 0.42 | -1.4 | |
3,582,182 | + | BWI76_RS17285 | 0.49 | -0.3 | |
3,582,221 | + | BWI76_RS17285 | 0.57 | -0.7 | |
3,582,270 | - | BWI76_RS17285 | 0.68 | -0.1 | |
3,582,321 | + | BWI76_RS17285 | 0.79 | +0.7 | |
3,582,321 | + | BWI76_RS17285 | 0.79 | -1.0 | |
3,582,482 | - | +0.2 | |||
3,582,500 | - | -0.6 | |||
3,582,663 | - | BWI76_RS17290 | 0.24 | +0.5 | |
3,582,663 | - | +0.7 | |||
3,582,706 | - | BWI76_RS17290 | 0.29 | +1.0 | |
3,582,763 | - | BWI76_RS17290 | 0.36 | -0.3 | |
3,583,036 | - | BWI76_RS17290 | 0.68 | -3.1 | |
3,583,176 | + | BWI76_RS17290 | 0.85 | +0.0 |
Or see this region's nucleotide sequence