Experiment: K. M5a1 KLEB22 MOI 0.1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS27385 and BWI76_RS27390 are separated by 65 nucleotides BWI76_RS27390 and BWI76_RS27395 are separated by 123 nucleotides BWI76_RS27395 and BWI76_RS27400 are separated by 73 nucleotides
BWI76_RS27385: BWI76_RS27385 - orotate phosphoribosyltransferase, at 5,682,399 to 5,683,040
_RS27385
BWI76_RS27390: BWI76_RS27390 - ribonuclease PH, at 5,683,106 to 5,683,822
_RS27390
BWI76_RS27395: BWI76_RS27395 - hypothetical protein, at 5,683,946 to 5,684,809
_RS27395
BWI76_RS27400: BWI76_RS27400 - chloride channel protein, at 5,684,883 to 5,686,142
_RS27400
Position (kb) 5683
5684
5685 Strain fitness (log2 ratio) -1
0
1 at 5683.011 kb on + strand at 5683.056 kb on - strand at 5683.142 kb on + strand at 5683.155 kb on + strand at 5683.194 kb on - strand, within BWI76_RS27390 at 5683.328 kb on + strand, within BWI76_RS27390 at 5683.468 kb on + strand, within BWI76_RS27390 at 5683.607 kb on + strand, within BWI76_RS27390 at 5683.652 kb on + strand, within BWI76_RS27390 at 5683.655 kb on - strand, within BWI76_RS27390 at 5683.719 kb on - strand, within BWI76_RS27390 at 5683.738 kb on + strand, within BWI76_RS27390 at 5683.772 kb on + strand at 5683.772 kb on + strand at 5683.780 kb on - strand at 5683.780 kb on - strand at 5683.798 kb on - strand at 5683.905 kb on + strand at 5683.913 kb on - strand at 5683.941 kb on + strand at 5683.941 kb on + strand at 5684.004 kb on - strand at 5684.106 kb on + strand, within BWI76_RS27395 at 5684.170 kb on + strand, within BWI76_RS27395 at 5684.178 kb on - strand, within BWI76_RS27395 at 5684.544 kb on + strand, within BWI76_RS27395 at 5684.565 kb on + strand, within BWI76_RS27395 at 5684.959 kb on - strand at 5684.964 kb on + strand at 5685.111 kb on - strand, within BWI76_RS27400 at 5685.446 kb on + strand, within BWI76_RS27400 at 5685.587 kb on - strand, within BWI76_RS27400 at 5685.619 kb on + strand, within BWI76_RS27400 at 5685.683 kb on + strand, within BWI76_RS27400 at 5685.773 kb on - strand, within BWI76_RS27400 at 5685.784 kb on - strand, within BWI76_RS27400 at 5685.797 kb on - strand, within BWI76_RS27400
Per-strain Table
Position Strand Gene LocusTag Fraction K. M5a1 KLEB22 MOI 0.1 remove 5,683,011 + -0.2 5,683,056 - +0.1 5,683,142 + +0.0 5,683,155 + +0.6 5,683,194 - BWI76_RS27390 0.12 +0.7 5,683,328 + BWI76_RS27390 0.31 +0.1 5,683,468 + BWI76_RS27390 0.50 -0.2 5,683,607 + BWI76_RS27390 0.70 +0.1 5,683,652 + BWI76_RS27390 0.76 -0.2 5,683,655 - BWI76_RS27390 0.77 -1.1 5,683,719 - BWI76_RS27390 0.85 +1.2 5,683,738 + BWI76_RS27390 0.88 +0.3 5,683,772 + +0.5 5,683,772 + +0.6 5,683,780 - +0.4 5,683,780 - -0.4 5,683,798 - -0.2 5,683,905 + +0.2 5,683,913 - -1.0 5,683,941 + -1.0 5,683,941 + -0.4 5,684,004 - +0.3 5,684,106 + BWI76_RS27395 0.19 -1.6 5,684,170 + BWI76_RS27395 0.26 +1.2 5,684,178 - BWI76_RS27395 0.27 -0.9 5,684,544 + BWI76_RS27395 0.69 -1.0 5,684,565 + BWI76_RS27395 0.72 -0.2 5,684,959 - +0.2 5,684,964 + -0.2 5,685,111 - BWI76_RS27400 0.18 -0.4 5,685,446 + BWI76_RS27400 0.45 +0.1 5,685,587 - BWI76_RS27400 0.56 +0.5 5,685,619 + BWI76_RS27400 0.58 -0.6 5,685,683 + BWI76_RS27400 0.63 +0.3 5,685,773 - BWI76_RS27400 0.71 +0.1 5,685,784 - BWI76_RS27400 0.72 +0.1 5,685,797 - BWI76_RS27400 0.73 -0.6
Or see this region's nucleotide sequence