Experiment: K. M5a1 KLEB22 MOI 0.1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS19650 and BWI76_RS19655 are separated by 155 nucleotides BWI76_RS19655 and BWI76_RS19660 are separated by 15 nucleotides BWI76_RS19660 and BWI76_RS19665 are separated by 242 nucleotides
BWI76_RS19650: BWI76_RS19650 - DNA-binding transcriptional regulator GalS, at 4,106,896 to 4,107,918
_RS19650
BWI76_RS19655: BWI76_RS19655 - hypothetical protein, at 4,108,074 to 4,109,231
_RS19655
BWI76_RS19660: BWI76_RS19660 - GTP cyclohydrolase I FolE, at 4,109,247 to 4,109,915
_RS19660
BWI76_RS19665: BWI76_RS19665 - hypothetical protein, at 4,110,158 to 4,110,355
_RS19665
Position (kb)
4108
4109
4110 Strain fitness (log2 ratio)
-1
0
1 at 4107.181 kb on + strand, within BWI76_RS19650 at 4107.198 kb on - strand, within BWI76_RS19650 at 4107.207 kb on + strand, within BWI76_RS19650 at 4107.398 kb on + strand, within BWI76_RS19650 at 4107.434 kb on - strand, within BWI76_RS19650 at 4107.528 kb on + strand, within BWI76_RS19650 at 4107.680 kb on + strand, within BWI76_RS19650 at 4107.850 kb on + strand at 4108.026 kb on - strand at 4108.231 kb on - strand, within BWI76_RS19655 at 4108.385 kb on - strand, within BWI76_RS19655 at 4108.552 kb on + strand, within BWI76_RS19655 at 4109.085 kb on + strand, within BWI76_RS19655 at 4109.085 kb on + strand, within BWI76_RS19655 at 4109.125 kb on + strand at 4109.236 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction K. M5a1 KLEB22 MOI 0.1 remove 4,107,181 + BWI76_RS19650 0.28 -0.4 4,107,198 - BWI76_RS19650 0.30 -0.7 4,107,207 + BWI76_RS19650 0.30 -0.0 4,107,398 + BWI76_RS19650 0.49 +0.5 4,107,434 - BWI76_RS19650 0.53 -0.3 4,107,528 + BWI76_RS19650 0.62 -0.8 4,107,680 + BWI76_RS19650 0.77 +0.7 4,107,850 + -0.5 4,108,026 - +0.3 4,108,231 - BWI76_RS19655 0.14 -0.5 4,108,385 - BWI76_RS19655 0.27 -1.0 4,108,552 + BWI76_RS19655 0.41 -0.4 4,109,085 + BWI76_RS19655 0.87 -0.4 4,109,085 + BWI76_RS19655 0.87 -0.4 4,109,125 + +0.4 4,109,236 - -0.6
Or see this region's nucleotide sequence