Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS26155
Experiment: K. M5a1 KLEB22 MOI 1
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | K. M5a1 KLEB22 MOI 1 |
---|---|---|---|---|---|
remove | |||||
5,402,696 | - | BWI76_RS26150 | 0.42 | -0.1 | |
5,402,770 | - | BWI76_RS26150 | 0.51 | -0.1 | |
5,402,838 | + | BWI76_RS26150 | 0.58 | -1.0 | |
5,402,892 | - | BWI76_RS26150 | 0.64 | +0.3 | |
5,403,369 | + | +0.9 | |||
5,403,414 | - | -0.8 | |||
5,403,498 | - | +0.7 | |||
5,403,598 | - | +0.1 | |||
5,403,598 | - | -0.4 | |||
5,403,792 | + | BWI76_RS26155 | 0.15 | +0.1 | |
5,403,800 | - | BWI76_RS26155 | 0.15 | -0.2 | |
5,404,074 | - | BWI76_RS26155 | 0.32 | -0.2 | |
5,404,098 | - | BWI76_RS26155 | 0.34 | -1.7 | |
5,404,144 | - | BWI76_RS26155 | 0.36 | -1.7 | |
5,404,239 | + | BWI76_RS26155 | 0.42 | -0.5 | |
5,404,247 | - | BWI76_RS26155 | 0.43 | -1.0 | |
5,404,312 | + | BWI76_RS26155 | 0.47 | +0.4 | |
5,404,689 | + | BWI76_RS26155 | 0.70 | -2.2 | |
5,404,947 | + | BWI76_RS26155 | 0.86 | -0.1 | |
5,404,981 | + | BWI76_RS26155 | 0.88 | -1.0 | |
5,405,039 | + | -0.0 | |||
5,405,145 | + | -0.3 | |||
5,405,266 | - | +0.3 | |||
5,405,319 | + | -0.4 | |||
5,405,338 | - | -0.4 | |||
5,405,593 | + | BWI76_RS26160 | 0.17 | -0.1 | |
5,405,621 | - | BWI76_RS26160 | 0.19 | +0.1 | |
5,405,840 | - | BWI76_RS26160 | 0.29 | -0.5 | |
5,405,847 | + | BWI76_RS26160 | 0.29 | +0.3 | |
5,405,916 | - | BWI76_RS26160 | 0.33 | -1.0 | |
5,406,167 | + | BWI76_RS26160 | 0.45 | +0.3 |
Or see this region's nucleotide sequence