Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS26155

Experiment: K. M5a1 KLEB22 MOI 1

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS26150 and BWI76_RS26155 are separated by 347 nucleotidesBWI76_RS26155 and BWI76_RS26160 are separated by 58 nucleotides BWI76_RS26150: BWI76_RS26150 - molecular chaperone Hsp33, at 5,402,326 to 5,403,204 _RS26150 BWI76_RS26155: BWI76_RS26155 - phosphoenolpyruvate carboxykinase (ATP), at 5,403,552 to 5,405,174 _RS26155 BWI76_RS26160: BWI76_RS26160 - 4-alpha-glucanotransferase (EC 2.4.1.25) (from data), at 5,405,233 to 5,407,326 _RS26160 Position (kb) 5403 5404 5405 5406Strain fitness (log2 ratio) -2 -1 0 1at 5402.696 kb on - strand, within BWI76_RS26150at 5402.770 kb on - strand, within BWI76_RS26150at 5402.838 kb on + strand, within BWI76_RS26150at 5402.892 kb on - strand, within BWI76_RS26150at 5403.369 kb on + strandat 5403.414 kb on - strandat 5403.498 kb on - strandat 5403.598 kb on - strandat 5403.598 kb on - strandat 5403.792 kb on + strand, within BWI76_RS26155at 5403.800 kb on - strand, within BWI76_RS26155at 5404.074 kb on - strand, within BWI76_RS26155at 5404.098 kb on - strand, within BWI76_RS26155at 5404.144 kb on - strand, within BWI76_RS26155at 5404.239 kb on + strand, within BWI76_RS26155at 5404.247 kb on - strand, within BWI76_RS26155at 5404.312 kb on + strand, within BWI76_RS26155at 5404.689 kb on + strand, within BWI76_RS26155at 5404.947 kb on + strand, within BWI76_RS26155at 5404.981 kb on + strand, within BWI76_RS26155at 5405.039 kb on + strandat 5405.145 kb on + strandat 5405.266 kb on - strandat 5405.319 kb on + strandat 5405.338 kb on - strandat 5405.593 kb on + strand, within BWI76_RS26160at 5405.621 kb on - strand, within BWI76_RS26160at 5405.840 kb on - strand, within BWI76_RS26160at 5405.847 kb on + strand, within BWI76_RS26160at 5405.916 kb on - strand, within BWI76_RS26160at 5406.167 kb on + strand, within BWI76_RS26160

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Per-strain Table

Position Strand Gene LocusTag Fraction K. M5a1 KLEB22 MOI 1
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5,402,696 - BWI76_RS26150 0.42 -0.1
5,402,770 - BWI76_RS26150 0.51 -0.1
5,402,838 + BWI76_RS26150 0.58 -1.0
5,402,892 - BWI76_RS26150 0.64 +0.3
5,403,369 + +0.9
5,403,414 - -0.8
5,403,498 - +0.7
5,403,598 - +0.1
5,403,598 - -0.4
5,403,792 + BWI76_RS26155 0.15 +0.1
5,403,800 - BWI76_RS26155 0.15 -0.2
5,404,074 - BWI76_RS26155 0.32 -0.2
5,404,098 - BWI76_RS26155 0.34 -1.7
5,404,144 - BWI76_RS26155 0.36 -1.7
5,404,239 + BWI76_RS26155 0.42 -0.5
5,404,247 - BWI76_RS26155 0.43 -1.0
5,404,312 + BWI76_RS26155 0.47 +0.4
5,404,689 + BWI76_RS26155 0.70 -2.2
5,404,947 + BWI76_RS26155 0.86 -0.1
5,404,981 + BWI76_RS26155 0.88 -1.0
5,405,039 + -0.0
5,405,145 + -0.3
5,405,266 - +0.3
5,405,319 + -0.4
5,405,338 - -0.4
5,405,593 + BWI76_RS26160 0.17 -0.1
5,405,621 - BWI76_RS26160 0.19 +0.1
5,405,840 - BWI76_RS26160 0.29 -0.5
5,405,847 + BWI76_RS26160 0.29 +0.3
5,405,916 - BWI76_RS26160 0.33 -1.0
5,406,167 + BWI76_RS26160 0.45 +0.3

Or see this region's nucleotide sequence