Experiment: K. M5a1 KLEB22 MOI 1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS19335 and BWI76_RS19340 are separated by 68 nucleotides BWI76_RS19340 and BWI76_RS19345 are separated by 9 nucleotides
BWI76_RS19335: BWI76_RS19335 - MFS transporter, at 4,028,088 to 4,029,365
_RS19335
BWI76_RS19340: BWI76_RS19340 - xylulokinase, at 4,029,434 to 4,030,897
_RS19340
BWI76_RS19345: BWI76_RS19345 - D-arabinitol 4-dehydrogenase, at 4,030,907 to 4,032,274
_RS19345
Position (kb)
4029
4030
4031 Strain fitness (log2 ratio)
-2
-1
0
1 at 4028.603 kb on - strand, within BWI76_RS19335 at 4028.637 kb on + strand, within BWI76_RS19335 at 4028.643 kb on - strand, within BWI76_RS19335 at 4028.698 kb on + strand, within BWI76_RS19335 at 4028.698 kb on + strand, within BWI76_RS19335 at 4028.698 kb on + strand, within BWI76_RS19335 at 4028.706 kb on - strand, within BWI76_RS19335 at 4028.706 kb on - strand, within BWI76_RS19335 at 4028.706 kb on - strand, within BWI76_RS19335 at 4028.878 kb on - strand, within BWI76_RS19335 at 4028.900 kb on + strand, within BWI76_RS19335 at 4029.173 kb on - strand, within BWI76_RS19335 at 4029.389 kb on - strand at 4029.795 kb on + strand, within BWI76_RS19340 at 4029.915 kb on + strand, within BWI76_RS19340 at 4030.277 kb on + strand, within BWI76_RS19340 at 4030.302 kb on - strand, within BWI76_RS19340 at 4030.325 kb on - strand, within BWI76_RS19340 at 4030.380 kb on - strand, within BWI76_RS19340 at 4030.467 kb on - strand, within BWI76_RS19340 at 4030.729 kb on - strand, within BWI76_RS19340 at 4030.771 kb on + strand at 4031.063 kb on - strand, within BWI76_RS19345 at 4031.247 kb on - strand, within BWI76_RS19345 at 4031.292 kb on - strand, within BWI76_RS19345 at 4031.377 kb on - strand, within BWI76_RS19345 at 4031.391 kb on - strand, within BWI76_RS19345 at 4031.779 kb on + strand, within BWI76_RS19345
Per-strain Table
Position Strand Gene LocusTag Fraction K. M5a1 KLEB22 MOI 1 remove 4,028,603 - BWI76_RS19335 0.40 +0.1 4,028,637 + BWI76_RS19335 0.43 -1.2 4,028,643 - BWI76_RS19335 0.43 +0.0 4,028,698 + BWI76_RS19335 0.48 -1.3 4,028,698 + BWI76_RS19335 0.48 -1.2 4,028,698 + BWI76_RS19335 0.48 +0.6 4,028,706 - BWI76_RS19335 0.48 -0.3 4,028,706 - BWI76_RS19335 0.48 +0.2 4,028,706 - BWI76_RS19335 0.48 -0.3 4,028,878 - BWI76_RS19335 0.62 -1.4 4,028,900 + BWI76_RS19335 0.64 -1.0 4,029,173 - BWI76_RS19335 0.85 -0.2 4,029,389 - +0.5 4,029,795 + BWI76_RS19340 0.25 -0.2 4,029,915 + BWI76_RS19340 0.33 -0.4 4,030,277 + BWI76_RS19340 0.58 -1.5 4,030,302 - BWI76_RS19340 0.59 -0.3 4,030,325 - BWI76_RS19340 0.61 +0.2 4,030,380 - BWI76_RS19340 0.65 -1.1 4,030,467 - BWI76_RS19340 0.71 -0.9 4,030,729 - BWI76_RS19340 0.88 -1.1 4,030,771 + -0.5 4,031,063 - BWI76_RS19345 0.11 +0.2 4,031,247 - BWI76_RS19345 0.25 -0.3 4,031,292 - BWI76_RS19345 0.28 +0.4 4,031,377 - BWI76_RS19345 0.34 +0.2 4,031,391 - BWI76_RS19345 0.35 -2.4 4,031,779 + BWI76_RS19345 0.64 +0.3
Or see this region's nucleotide sequence