Experiment: K. M5a1 KLEB22 MOI 1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS19185 and BWI76_RS19190 overlap by 1 nucleotides BWI76_RS19190 and BWI76_RS19195 overlap by 4 nucleotides BWI76_RS19195 and BWI76_RS19200 overlap by 4 nucleotides
BWI76_RS19185: BWI76_RS19185 - ABC transporter ATP-binding protein, at 3,993,449 to 3,994,483
_RS19185
BWI76_RS19190: BWI76_RS19190 - oligopeptide/dipeptide ABC transporter ATPase, at 3,994,483 to 3,995,463
_RS19190
BWI76_RS19195: BWI76_RS19195 - nickel ABC transporter permease, at 3,995,460 to 3,996,306
_RS19195
BWI76_RS19200: BWI76_RS19200 - binding-protein-dependent transport system inner membrane protein, at 3,996,303 to 3,997,241
_RS19200
Position (kb)
3994
3995
3996 Strain fitness (log2 ratio)
-1
0
1
2 at 3993.597 kb on + strand, within BWI76_RS19185 at 3993.731 kb on - strand, within BWI76_RS19185 at 3993.743 kb on + strand, within BWI76_RS19185 at 3993.890 kb on + strand, within BWI76_RS19185 at 3993.915 kb on - strand, within BWI76_RS19185 at 3994.031 kb on + strand, within BWI76_RS19185 at 3994.236 kb on + strand, within BWI76_RS19185 at 3994.294 kb on + strand, within BWI76_RS19185 at 3994.373 kb on + strand, within BWI76_RS19185 at 3994.438 kb on + strand at 3994.473 kb on + strand at 3994.625 kb on + strand, within BWI76_RS19190 at 3994.729 kb on - strand, within BWI76_RS19190 at 3994.914 kb on + strand, within BWI76_RS19190 at 3995.142 kb on + strand, within BWI76_RS19190 at 3995.398 kb on - strand at 3995.504 kb on + strand at 3995.621 kb on + strand, within BWI76_RS19195 at 3995.880 kb on - strand, within BWI76_RS19195 at 3995.929 kb on + strand, within BWI76_RS19195 at 3996.076 kb on - strand, within BWI76_RS19195 at 3996.078 kb on - strand, within BWI76_RS19195 at 3996.374 kb on + strand at 3996.433 kb on + strand, within BWI76_RS19200
Per-strain Table
Position Strand Gene LocusTag Fraction K. M5a1 KLEB22 MOI 1 remove 3,993,597 + BWI76_RS19185 0.14 -0.1 3,993,731 - BWI76_RS19185 0.27 +0.5 3,993,743 + BWI76_RS19185 0.28 -0.4 3,993,890 + BWI76_RS19185 0.43 -0.2 3,993,915 - BWI76_RS19185 0.45 -0.4 3,994,031 + BWI76_RS19185 0.56 +0.1 3,994,236 + BWI76_RS19185 0.76 -1.1 3,994,294 + BWI76_RS19185 0.82 +0.1 3,994,373 + BWI76_RS19185 0.89 -0.1 3,994,438 + +0.6 3,994,473 + -0.5 3,994,625 + BWI76_RS19190 0.14 -0.5 3,994,729 - BWI76_RS19190 0.25 -0.6 3,994,914 + BWI76_RS19190 0.44 +0.1 3,995,142 + BWI76_RS19190 0.67 -1.7 3,995,398 - +0.8 3,995,504 + -0.8 3,995,621 + BWI76_RS19195 0.19 -0.4 3,995,880 - BWI76_RS19195 0.50 -0.5 3,995,929 + BWI76_RS19195 0.55 +2.1 3,996,076 - BWI76_RS19195 0.73 +0.4 3,996,078 - BWI76_RS19195 0.73 +0.2 3,996,374 + -0.5 3,996,433 + BWI76_RS19200 0.14 -0.0
Or see this region's nucleotide sequence