Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS18260

Experiment: K. M5a1 KLEB22 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	K. M5a1 KLEB22 MOI 1
3,793,996	+		BWI76_RS18255	0.21	+0.0
3,794,002	-		BWI76_RS18255	0.22	+0.8
3,794,002	-		BWI76_RS18255	0.22	+0.1
3,794,027	-		BWI76_RS18255	0.26	+0.6
3,794,064	+		BWI76_RS18255	0.33	-0.3
3,794,097	+		BWI76_RS18255	0.38	+0.2
3,794,097	+		BWI76_RS18255	0.38	+0.4
3,794,143	+		BWI76_RS18255	0.46	-0.7
3,794,144	-		BWI76_RS18255	0.47	+0.1
3,794,153	+		BWI76_RS18255	0.48	+0.7
3,794,198	+		BWI76_RS18255	0.56	-0.4
3,794,215	+				+3.1
3,794,230	+		BWI76_RS18255	0.62	-0.0
3,794,241	+		BWI76_RS18255	0.64	-0.8
3,794,306	-		BWI76_RS18255	0.75	+0.2
3,794,311	+		BWI76_RS18255	0.76	+0.4
3,794,318	+		BWI76_RS18255	0.77	-0.5
3,794,318	+		BWI76_RS18255	0.77	-0.5
3,794,318	+		BWI76_RS18255	0.77	-0.9
3,794,326	-		BWI76_RS18255	0.78	-0.5
3,794,326	-		BWI76_RS18255	0.78	-0.2
3,794,326	-		BWI76_RS18255	0.78	-0.0
3,794,326	-		BWI76_RS18255	0.78	-0.5
3,794,326	-		BWI76_RS18255	0.78	-0.2
3,794,343	-		BWI76_RS18255	0.81	+0.5
3,794,345	+		BWI76_RS18255	0.82	+2.8
3,794,348	-		BWI76_RS18255	0.82	-0.3
3,794,348	-		BWI76_RS18255	0.82	+0.9
3,794,353	+		BWI76_RS18255	0.83	-0.2
3,794,353	+		BWI76_RS18255	0.83	-0.2
3,794,353	+		BWI76_RS18255	0.83	-0.4
3,794,353	+		BWI76_RS18255	0.83	-1.0
3,794,353	+		BWI76_RS18255	0.83	-0.2
3,794,353	-		BWI76_RS18255	0.83	-2.2
3,794,353	-		BWI76_RS18255	0.83	+0.3
3,794,361	-		BWI76_RS18255	0.84	-0.1
3,794,361	-		BWI76_RS18255	0.84	+0.4
3,794,361	-		BWI76_RS18255	0.84	-1.6
3,794,361	-		BWI76_RS18255	0.84	-2.4
3,794,361	-		BWI76_RS18255	0.84	-0.1
3,794,372	-				+0.5
3,794,399	+				-0.8
3,794,407	-				+0.3
3,794,410	+				+0.6
3,794,418	-				-0.1
3,794,418	-				-0.2
3,794,418	-				-1.6
3,794,440	-				-0.3
3,794,462	-				-1.0
3,794,466	-				-0.0
3,794,476	+				-2.1
3,794,484	-				-0.2
3,794,484	-				-0.1
3,794,484	-				+1.6
3,794,484	-				+1.8
3,794,484	-				-0.8
3,794,522	+				+0.3
3,794,530	-				-0.1
3,794,530	-				-1.0
3,794,540	-				-0.7
3,794,542	+				-0.4
3,794,542	+				+1.1
3,794,542	+				-2.1
3,794,542	+				+1.3
3,794,542	+				-1.0
3,794,542	+				+1.3
3,794,550	-				-0.2
3,794,550	-				-0.4
3,794,550	-				-2.0
3,794,550	-				-0.5
3,794,550	-				+0.4
3,794,550	-				+0.5
3,794,550	-				+0.5
3,794,550	-				-0.2
3,794,550	-				-0.6
3,794,550	-				-0.5
3,794,550	-				-0.7
3,794,550	-				-0.2
3,794,550	-				-0.2
3,794,550	-				-0.3
3,794,550	-				+0.2
3,794,550	-				-0.6
3,794,550	-				+0.2
3,794,555	-				-1.1
3,794,860	+				+0.2
3,794,860	+				-0.8
3,794,896	-				-0.1
3,794,933	+				+0.3
3,794,939	-				-0.5
3,794,940	-				-0.1
3,794,940	-				-2.8
3,794,942	+				-1.2
3,794,947	+				+0.9
3,794,947	+				+0.0
3,794,947	+				+0.6
3,794,954	+				-0.7
3,794,954	+				+0.5
3,794,954	+				-0.4
3,794,955	+				-1.6
3,794,955	+				+1.3
3,794,955	-				-1.8
3,794,963	+				+0.4
3,795,077	+		BWI76_RS18260	0.17	-1.6
3,795,082	+		BWI76_RS18260	0.18	-1.2
3,795,082	+		BWI76_RS18260	0.18	+0.2
3,795,082	+		BWI76_RS18260	0.18	-1.0
3,795,085	-		BWI76_RS18260	0.19	+0.8
3,795,088	-		BWI76_RS18260	0.20	-3.8
3,795,090	-				-0.5
3,795,090	-		BWI76_RS18260	0.20	-2.0
3,795,090	-		BWI76_RS18260	0.20	-0.3
3,795,090	-		BWI76_RS18260	0.20	-1.2
3,795,090	-		BWI76_RS18260	0.20	-1.4
3,795,090	-		BWI76_RS18260	0.20	-0.5
3,795,091	+		BWI76_RS18260	0.20	+0.8
3,795,099	-		BWI76_RS18260	0.22	-1.4
3,795,132	+		BWI76_RS18260	0.28	-1.3
3,795,137	+		BWI76_RS18260	0.29	-1.2
3,795,145	-		BWI76_RS18260	0.31	-0.2
3,795,145	-		BWI76_RS18260	0.31	-2.1
3,795,235	+		BWI76_RS18260	0.49	-0.8
3,795,289	+		BWI76_RS18260	0.60	-0.9
3,795,289	+		BWI76_RS18260	0.60	+0.4
3,795,337	-		BWI76_RS18260	0.69	-0.2
3,795,479	-				-1.0
3,795,493	+				-0.1
3,795,500	-				-0.5
3,795,500	-				-1.0
3,795,549	-				-0.1
3,795,553	-				-0.5
3,795,558	-				-0.5
3,795,656	+				+0.1
3,795,664	-				-0.2
3,795,774	-				-0.1
3,795,778	-				-1.2
3,795,822	-				-0.7
3,795,899	+				+0.3
3,796,023	-		BWI76_RS18265	0.18	+0.6
3,796,077	+		BWI76_RS18265	0.21	-0.3
3,796,082	+		BWI76_RS18265	0.22	+0.3
3,796,082	+				+0.8
3,796,082	+		BWI76_RS18265	0.22	+0.1
3,796,213	-		BWI76_RS18265	0.30	+0.6
3,796,277	+		BWI76_RS18265	0.34	-0.5
3,796,277	+		BWI76_RS18265	0.34	-0.0
3,796,369	-		BWI76_RS18265	0.40	-2.7
3,796,439	+		BWI76_RS18265	0.44	-0.1
3,796,442	-		BWI76_RS18265	0.45	-0.1