Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS02150

Experiment: K. M5a1 KLEB22 MOI 1

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS02145 and BWI76_RS02150 overlap by 17 nucleotidesBWI76_RS02150 and BWI76_RS02155 are separated by 10 nucleotidesBWI76_RS02155 and BWI76_RS02160 overlap by 22 nucleotides BWI76_RS02145: BWI76_RS02145 - allose kinase, at 446,104 to 447,030 _RS02145 BWI76_RS02150: BWI76_RS02150 - allulose-6-phosphate 3-epimerase, at 447,014 to 447,709 _RS02150 BWI76_RS02155: BWI76_RS02155 - D-allose transporter subunit, at 447,720 to 448,700 _RS02155 BWI76_RS02160: BWI76_RS02160 - D-allose transporter ATP-binding protein, at 448,679 to 450,211 _RS02160 Position (kb) 447 448Strain fitness (log2 ratio) -2 -1 0 1 2at 446.026 kb on + strandat 446.026 kb on + strandat 446.027 kb on + strandat 446.056 kb on + strandat 446.058 kb on - strandat 446.062 kb on + strandat 446.077 kb on - strandat 446.077 kb on - strandat 446.082 kb on + strandat 446.088 kb on + strandat 446.091 kb on - strandat 446.095 kb on + strandat 446.101 kb on + strandat 446.102 kb on - strandat 446.103 kb on - strandat 446.109 kb on - strandat 446.111 kb on + strandat 446.117 kb on + strandat 446.117 kb on - strandat 446.117 kb on - strandat 446.127 kb on + strandat 446.129 kb on - strandat 446.135 kb on - strandat 446.135 kb on - strandat 446.148 kb on + strandat 446.155 kb on + strandat 446.158 kb on - strandat 446.158 kb on - strandat 446.158 kb on - strandat 446.167 kb on + strandat 446.167 kb on + strandat 446.167 kb on + strandat 446.167 kb on + strandat 446.167 kb on + strandat 446.167 kb on + strandat 446.173 kb on - strandat 446.173 kb on - strandat 446.175 kb on - strandat 446.175 kb on - strandat 446.175 kb on - strandat 446.197 kb on + strand, within BWI76_RS02145at 446.197 kb on - strand, within BWI76_RS02145at 446.197 kb on - strand, within BWI76_RS02145at 446.212 kb on - strand, within BWI76_RS02145at 446.222 kb on - strand, within BWI76_RS02145at 446.229 kb on + strand, within BWI76_RS02145at 446.234 kb on + strand, within BWI76_RS02145at 446.234 kb on + strand, within BWI76_RS02145at 446.237 kb on - strand, within BWI76_RS02145at 446.241 kb on - strand, within BWI76_RS02145at 446.242 kb on - strand, within BWI76_RS02145at 446.262 kb on - strand, within BWI76_RS02145at 446.286 kb on - strand, within BWI76_RS02145at 446.288 kb on - strand, within BWI76_RS02145at 446.306 kb on - strand, within BWI76_RS02145at 446.322 kb on + strand, within BWI76_RS02145at 446.322 kb on + strand, within BWI76_RS02145at 446.340 kb on - strand, within BWI76_RS02145at 446.425 kb on + strand, within BWI76_RS02145at 446.446 kb on + strand, within BWI76_RS02145at 446.452 kb on - strand, within BWI76_RS02145at 446.506 kb on - strand, within BWI76_RS02145at 446.596 kb on + strand, within BWI76_RS02145at 446.604 kb on - strand, within BWI76_RS02145at 446.604 kb on - strand, within BWI76_RS02145at 446.628 kb on + strand, within BWI76_RS02145at 446.645 kb on - strand, within BWI76_RS02145at 446.707 kb on + strand, within BWI76_RS02145at 446.715 kb on - strand, within BWI76_RS02145at 446.715 kb on - strand, within BWI76_RS02145at 446.717 kb on + strand, within BWI76_RS02145at 446.717 kb on + strand, within BWI76_RS02145at 446.717 kb on + strand, within BWI76_RS02145at 446.725 kb on - strand, within BWI76_RS02145at 446.725 kb on - strand, within BWI76_RS02145at 446.725 kb on - strand, within BWI76_RS02145at 446.730 kb on + strand, within BWI76_RS02145at 446.913 kb on + strand, within BWI76_RS02145at 446.916 kb on - strand, within BWI76_RS02145at 446.943 kb on + strandat 446.985 kb on - strandat 446.985 kb on - strandat 446.998 kb on - strandat 447.029 kb on - strandat 447.123 kb on - strand, within BWI76_RS02150at 447.481 kb on - strand, within BWI76_RS02150at 447.487 kb on + strand, within BWI76_RS02150at 447.492 kb on + strand, within BWI76_RS02150at 447.500 kb on - strand, within BWI76_RS02150at 447.500 kb on - strand, within BWI76_RS02150at 447.581 kb on + strand, within BWI76_RS02150at 447.676 kb on + strandat 447.676 kb on + strandat 447.676 kb on + strandat 447.684 kb on - strandat 447.686 kb on - strandat 447.686 kb on - strandat 447.694 kb on - strandat 447.694 kb on - strandat 447.792 kb on + strandat 448.074 kb on - strand, within BWI76_RS02155at 448.221 kb on + strand, within BWI76_RS02155at 448.229 kb on - strand, within BWI76_RS02155at 448.412 kb on + strand, within BWI76_RS02155at 448.412 kb on + strand, within BWI76_RS02155at 448.564 kb on - strand, within BWI76_RS02155at 448.638 kb on - strandat 448.638 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction K. M5a1 KLEB22 MOI 1
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446,026 + -0.5
446,026 + -0.4
446,027 + -0.3
446,056 + +1.0
446,058 - -1.0
446,062 + -0.4
446,077 - -2.5
446,077 - +1.7
446,082 + -1.9
446,088 + -0.9
446,091 - -0.2
446,095 + -0.5
446,101 + +0.9
446,102 - +0.2
446,103 - -0.5
446,109 - -0.7
446,111 + -0.1
446,117 + -0.6
446,117 - -0.5
446,117 - -0.3
446,127 + -1.8
446,129 - +1.2
446,135 - -0.7
446,135 - -0.7
446,148 + +0.5
446,155 + +0.1
446,158 - -0.9
446,158 - +0.2
446,158 - -0.2
446,167 + +2.0
446,167 + -1.0
446,167 + +0.1
446,167 + +0.0
446,167 + +0.0
446,167 + -2.7
446,173 - +0.2
446,173 - +2.3
446,175 - +0.8
446,175 - -0.7
446,175 - -0.6
446,197 + BWI76_RS02145 0.10 +0.7
446,197 - BWI76_RS02145 0.10 -0.6
446,197 - BWI76_RS02145 0.10 -0.4
446,212 - BWI76_RS02145 0.12 -0.9
446,222 - BWI76_RS02145 0.13 -0.6
446,229 + BWI76_RS02145 0.13 +0.6
446,234 + BWI76_RS02145 0.14 -0.3
446,234 + BWI76_RS02145 0.14 -0.3
446,237 - BWI76_RS02145 0.14 +0.5
446,241 - BWI76_RS02145 0.15 +0.4
446,242 - BWI76_RS02145 0.15 -0.6
446,262 - BWI76_RS02145 0.17 -0.2
446,286 - BWI76_RS02145 0.20 -0.8
446,288 - BWI76_RS02145 0.20 -0.4
446,306 - BWI76_RS02145 0.22 +0.2
446,322 + BWI76_RS02145 0.24 -0.2
446,322 + BWI76_RS02145 0.24 +0.7
446,340 - BWI76_RS02145 0.25 -0.5
446,425 + BWI76_RS02145 0.35 -0.3
446,446 + BWI76_RS02145 0.37 +0.3
446,452 - BWI76_RS02145 0.38 -0.6
446,506 - BWI76_RS02145 0.43 +1.4
446,596 + BWI76_RS02145 0.53 -0.1
446,604 - BWI76_RS02145 0.54 -0.6
446,604 - BWI76_RS02145 0.54 +0.1
446,628 + BWI76_RS02145 0.57 -0.6
446,645 - BWI76_RS02145 0.58 +1.2
446,707 + BWI76_RS02145 0.65 -0.0
446,715 - BWI76_RS02145 0.66 -0.2
446,715 - BWI76_RS02145 0.66 +0.2
446,717 + BWI76_RS02145 0.66 +0.4
446,717 + BWI76_RS02145 0.66 -0.0
446,717 + BWI76_RS02145 0.66 +0.5
446,725 - BWI76_RS02145 0.67 +0.9
446,725 - BWI76_RS02145 0.67 +0.4
446,725 - BWI76_RS02145 0.67 -0.6
446,730 + BWI76_RS02145 0.68 +0.6
446,913 + BWI76_RS02145 0.87 -0.2
446,916 - BWI76_RS02145 0.88 -0.7
446,943 + -0.1
446,985 - -0.1
446,985 - -0.5
446,998 - -0.5
447,029 - -0.5
447,123 - BWI76_RS02150 0.16 -0.2
447,481 - BWI76_RS02150 0.67 -0.2
447,487 + BWI76_RS02150 0.68 -0.4
447,492 + BWI76_RS02150 0.69 -1.3
447,500 - BWI76_RS02150 0.70 -0.7
447,500 - BWI76_RS02150 0.70 -0.8
447,581 + BWI76_RS02150 0.81 -1.0
447,676 + +2.6
447,676 + -1.2
447,676 + -0.9
447,684 - +1.1
447,686 - -0.3
447,686 - +0.0
447,694 - -0.0
447,694 - -0.4
447,792 + -0.6
448,074 - BWI76_RS02155 0.36 +0.1
448,221 + BWI76_RS02155 0.51 -0.3
448,229 - BWI76_RS02155 0.52 -0.8
448,412 + BWI76_RS02155 0.71 +0.3
448,412 + BWI76_RS02155 0.71 +0.1
448,564 - BWI76_RS02155 0.86 -0.3
448,638 - -0.2
448,638 - +0.5

Or see this region's nucleotide sequence