Experiment: K. M5a1 KLEB22 MOI 1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS00300 and BWI76_RS00305 are separated by 3 nucleotides BWI76_RS00305 and BWI76_RS00310 are separated by 476 nucleotides
BWI76_RS00300: BWI76_RS00300 - MFS transporter, at 62,157 to 63,554
_RS00300
BWI76_RS00305: BWI76_RS00305 - GntR family transcriptional regulator, at 63,558 to 64,268
_RS00305
BWI76_RS00310: BWI76_RS00310 - 16S ribosomal RNA, at 64,745 to 66,298
_RS00310
Position (kb) 63
64
65 Strain fitness (log2 ratio) -1
0
1
2 at 62.584 kb on - strand, within BWI76_RS00300 at 62.599 kb on - strand, within BWI76_RS00300 at 62.633 kb on + strand, within BWI76_RS00300 at 62.673 kb on + strand, within BWI76_RS00300 at 62.730 kb on - strand, within BWI76_RS00300 at 62.814 kb on - strand, within BWI76_RS00300 at 63.029 kb on - strand, within BWI76_RS00300 at 63.075 kb on + strand, within BWI76_RS00300 at 63.088 kb on - strand, within BWI76_RS00300 at 63.098 kb on - strand, within BWI76_RS00300 at 63.110 kb on - strand, within BWI76_RS00300 at 63.115 kb on - strand, within BWI76_RS00300 at 63.129 kb on - strand, within BWI76_RS00300 at 63.129 kb on - strand, within BWI76_RS00300 at 63.130 kb on - strand, within BWI76_RS00300 at 63.404 kb on - strand, within BWI76_RS00300 at 63.429 kb on + strand at 63.442 kb on - strand at 63.460 kb on + strand at 63.519 kb on - strand at 63.526 kb on + strand at 63.636 kb on + strand, within BWI76_RS00305 at 63.668 kb on + strand, within BWI76_RS00305 at 63.690 kb on - strand, within BWI76_RS00305 at 63.706 kb on + strand, within BWI76_RS00305 at 63.722 kb on - strand, within BWI76_RS00305 at 63.811 kb on - strand, within BWI76_RS00305 at 63.862 kb on + strand, within BWI76_RS00305 at 63.862 kb on - strand, within BWI76_RS00305 at 63.870 kb on - strand, within BWI76_RS00305 at 63.923 kb on + strand, within BWI76_RS00305 at 63.928 kb on + strand, within BWI76_RS00305 at 63.931 kb on - strand, within BWI76_RS00305 at 63.941 kb on - strand, within BWI76_RS00305 at 63.962 kb on + strand, within BWI76_RS00305 at 63.962 kb on - strand, within BWI76_RS00305 at 63.980 kb on - strand, within BWI76_RS00305 at 64.063 kb on + strand, within BWI76_RS00305 at 64.076 kb on + strand, within BWI76_RS00305 at 64.117 kb on - strand, within BWI76_RS00305 at 64.150 kb on - strand, within BWI76_RS00305 at 64.212 kb on - strand at 64.233 kb on - strand at 64.251 kb on - strand at 64.274 kb on - strand at 64.293 kb on + strand at 64.433 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction K. M5a1 KLEB22 MOI 1 remove 62,584 - BWI76_RS00300 0.31 +0.2 62,599 - BWI76_RS00300 0.32 +0.1 62,633 + BWI76_RS00300 0.34 +0.2 62,673 + BWI76_RS00300 0.37 +1.3 62,730 - BWI76_RS00300 0.41 -0.1 62,814 - BWI76_RS00300 0.47 +0.2 63,029 - BWI76_RS00300 0.62 +2.4 63,075 + BWI76_RS00300 0.66 +0.2 63,088 - BWI76_RS00300 0.67 -0.1 63,098 - BWI76_RS00300 0.67 -0.3 63,110 - BWI76_RS00300 0.68 -0.4 63,115 - BWI76_RS00300 0.69 +0.6 63,129 - BWI76_RS00300 0.70 +0.2 63,129 - BWI76_RS00300 0.70 +1.0 63,130 - BWI76_RS00300 0.70 -0.1 63,404 - BWI76_RS00300 0.89 +0.4 63,429 + -0.4 63,442 - -0.3 63,460 + +1.2 63,519 - +0.2 63,526 + -0.9 63,636 + BWI76_RS00305 0.11 -0.6 63,668 + BWI76_RS00305 0.15 +1.3 63,690 - BWI76_RS00305 0.19 +0.4 63,706 + BWI76_RS00305 0.21 -1.7 63,722 - BWI76_RS00305 0.23 +0.2 63,811 - BWI76_RS00305 0.36 +0.0 63,862 + BWI76_RS00305 0.43 +1.3 63,862 - BWI76_RS00305 0.43 +0.4 63,870 - BWI76_RS00305 0.44 +0.1 63,923 + BWI76_RS00305 0.51 +0.7 63,928 + BWI76_RS00305 0.52 -0.7 63,931 - BWI76_RS00305 0.52 +0.7 63,941 - BWI76_RS00305 0.54 +0.6 63,962 + BWI76_RS00305 0.57 +0.6 63,962 - BWI76_RS00305 0.57 +0.3 63,980 - BWI76_RS00305 0.59 +0.1 64,063 + BWI76_RS00305 0.71 +0.1 64,076 + BWI76_RS00305 0.73 -0.2 64,117 - BWI76_RS00305 0.79 -0.6 64,150 - BWI76_RS00305 0.83 -0.2 64,212 - +0.3 64,233 - -0.7 64,251 - +0.8 64,274 - +0.1 64,293 + +0.2 64,433 - -0.3
Or see this region's nucleotide sequence