Experiment: K. M5a1 KLEB22 MOI 1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS27445 and BWI76_RS27450 are separated by 95 nucleotides BWI76_RS27450 and BWI76_RS27455 are separated by 0 nucleotides BWI76_RS27455 and BWI76_RS27460 are separated by 112 nucleotides BWI76_RS27460 and BWI76_RS27465 are separated by 108 nucleotides
BWI76_RS27445: BWI76_RS27445 - fructose-bisphosphatase class II, at 5,694,899 to 5,695,909
_RS27445
BWI76_RS27450: BWI76_RS27450 - ferredoxin--NADP(+) reductase, at 5,696,005 to 5,696,751
_RS27450
BWI76_RS27455: BWI76_RS27455 - DUF805 domain-containing protein, at 5,696,752 to 5,697,180
_RS27455
BWI76_RS27460: BWI76_RS27460 - hypothetical protein, at 5,697,293 to 5,697,892
_RS27460
BWI76_RS27465: BWI76_RS27465 - triose-phosphate isomerase, at 5,698,001 to 5,698,768
_RS27465
Position (kb) 5696
5697
5698 Strain fitness (log2 ratio) -2
-1
0
1
2 at 5695.771 kb on + strand, within BWI76_RS27445 at 5695.880 kb on + strand at 5696.061 kb on + strand at 5696.392 kb on + strand, within BWI76_RS27450 at 5696.400 kb on - strand, within BWI76_RS27450 at 5696.429 kb on - strand, within BWI76_RS27450 at 5696.497 kb on - strand, within BWI76_RS27450 at 5696.627 kb on + strand, within BWI76_RS27450 at 5696.637 kb on - strand, within BWI76_RS27450 at 5696.864 kb on + strand, within BWI76_RS27455 at 5696.942 kb on + strand, within BWI76_RS27455 at 5697.030 kb on + strand, within BWI76_RS27455 at 5697.168 kb on + strand at 5697.168 kb on + strand at 5697.176 kb on - strand at 5697.176 kb on - strand at 5697.181 kb on + strand at 5697.360 kb on - strand, within BWI76_RS27460 at 5697.457 kb on + strand, within BWI76_RS27460 at 5697.518 kb on + strand, within BWI76_RS27460 at 5697.518 kb on + strand, within BWI76_RS27460 at 5697.659 kb on + strand, within BWI76_RS27460 at 5697.673 kb on - strand, within BWI76_RS27460 at 5697.864 kb on + strand at 5697.870 kb on - strand at 5697.921 kb on + strand at 5697.921 kb on + strand at 5697.929 kb on + strand at 5697.941 kb on + strand at 5697.943 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction K. M5a1 KLEB22 MOI 1 remove 5,695,771 + BWI76_RS27445 0.86 -0.7 5,695,880 + +0.6 5,696,061 + -0.2 5,696,392 + BWI76_RS27450 0.52 +2.6 5,696,400 - BWI76_RS27450 0.53 +0.3 5,696,429 - BWI76_RS27450 0.57 +0.1 5,696,497 - BWI76_RS27450 0.66 +0.2 5,696,627 + BWI76_RS27450 0.83 -0.0 5,696,637 - BWI76_RS27450 0.85 -1.1 5,696,864 + BWI76_RS27455 0.26 -0.4 5,696,942 + BWI76_RS27455 0.44 -1.1 5,697,030 + BWI76_RS27455 0.65 -0.5 5,697,168 + -0.8 5,697,168 + -0.1 5,697,176 - +0.5 5,697,176 - +0.6 5,697,181 + +0.0 5,697,360 - BWI76_RS27460 0.11 +0.3 5,697,457 + BWI76_RS27460 0.27 +1.0 5,697,518 + BWI76_RS27460 0.38 -0.6 5,697,518 + BWI76_RS27460 0.38 -0.2 5,697,659 + BWI76_RS27460 0.61 -0.6 5,697,673 - BWI76_RS27460 0.63 +0.8 5,697,864 + -0.0 5,697,870 - +0.1 5,697,921 + -0.2 5,697,921 + -2.1 5,697,929 + +0.0 5,697,941 + +0.1 5,697,943 + +0.6
Or see this region's nucleotide sequence