Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS14860
Experiment: K. M5a1 KLEB22 MOI 1
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | K. M5a1 KLEB22 MOI 1 |
---|---|---|---|---|---|
remove | |||||
3,111,842 | + | BWI76_RS14855 | 0.15 | +0.7 | |
3,111,844 | - | BWI76_RS14855 | 0.15 | -0.0 | |
3,111,907 | + | BWI76_RS14855 | 0.21 | +0.0 | |
3,111,972 | - | BWI76_RS14855 | 0.28 | +0.8 | |
3,112,231 | - | BWI76_RS14855 | 0.55 | -0.0 | |
3,112,435 | + | BWI76_RS14855 | 0.77 | -0.0 | |
3,112,527 | + | BWI76_RS14855 | 0.86 | -1.0 | |
3,112,554 | + | BWI76_RS14855 | 0.89 | -0.4 | |
3,112,712 | - | -0.5 | |||
3,112,743 | + | +2.1 | |||
3,112,859 | + | +0.1 | |||
3,112,859 | + | -0.2 | |||
3,112,962 | - | BWI76_RS14860 | 0.16 | +0.0 | |
3,113,005 | - | BWI76_RS14860 | 0.18 | -0.4 | |
3,113,052 | - | BWI76_RS14860 | 0.22 | +0.4 | |
3,113,297 | - | BWI76_RS14860 | 0.38 | -0.7 | |
3,113,344 | - | BWI76_RS14860 | 0.41 | -1.9 | |
3,113,551 | + | BWI76_RS14860 | 0.54 | +0.3 | |
3,113,602 | - | BWI76_RS14860 | 0.57 | +1.7 | |
3,113,870 | - | BWI76_RS14860 | 0.75 | -1.0 | |
3,113,915 | + | BWI76_RS14860 | 0.78 | -0.1 | |
3,114,106 | - | -0.1 | |||
3,114,353 | + | BWI76_RS14865 | 0.11 | -1.2 | |
3,114,684 | - | BWI76_RS14865 | 0.43 | -0.4 | |
3,114,741 | + | BWI76_RS14865 | 0.49 | +1.7 | |
3,115,035 | - | BWI76_RS14865 | 0.78 | +0.0 |
Or see this region's nucleotide sequence