Experiment: K. M5a1 KLEB22 MOI 1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS13235 and BWI76_RS13240 are separated by 279 nucleotides BWI76_RS13240 and BWI76_RS13245 are separated by 318 nucleotides BWI76_RS13245 and BWI76_RS13250 are separated by 225 nucleotides BWI76_RS13250 and BWI76_RS13255 are separated by 169 nucleotides
BWI76_RS13235: BWI76_RS13235 - hypothetical protein, at 2,762,156 to 2,762,359
_RS13235
BWI76_RS13240: BWI76_RS13240 - hypothetical protein, at 2,762,639 to 2,762,836
_RS13240
BWI76_RS13245: BWI76_RS13245 - DNA-damage-inducible protein I, at 2,763,155 to 2,763,397
_RS13245
BWI76_RS13250: BWI76_RS13250 - cytochrome b561, at 2,763,623 to 2,764,150
_RS13250
BWI76_RS13255: BWI76_RS13255 - hypothetical protein, at 2,764,320 to 2,764,595
_RS13255
Position (kb) 2763
2764 Strain fitness (log2 ratio) -2
-1
0
1 at 2762.249 kb on + strand, within BWI76_RS13235 at 2762.757 kb on - strand, within BWI76_RS13240 at 2763.340 kb on + strand, within BWI76_RS13245 at 2763.350 kb on + strand, within BWI76_RS13245 at 2763.465 kb on - strand at 2763.471 kb on - strand at 2763.472 kb on - strand at 2763.518 kb on - strand at 2763.518 kb on - strand at 2763.838 kb on + strand, within BWI76_RS13250
Per-strain Table
Position Strand Gene LocusTag Fraction K. M5a1 KLEB22 MOI 1 remove 2,762,249 + BWI76_RS13235 0.46 +0.5 2,762,757 - BWI76_RS13240 0.60 +0.5 2,763,340 + BWI76_RS13245 0.76 -0.8 2,763,350 + BWI76_RS13245 0.80 +0.1 2,763,465 - +0.3 2,763,471 - -0.9 2,763,472 - -2.4 2,763,518 - +0.2 2,763,518 - -0.6 2,763,838 + BWI76_RS13250 0.41 -0.7
Or see this region's nucleotide sequence