Experiment: K. M5a1 KLEB22 MOI 1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS13035 and BWI76_RS13040 are separated by 102 nucleotides BWI76_RS13040 and BWI76_RS13045 are separated by 161 nucleotides BWI76_RS13045 and BWI76_RS13050 are separated by 148 nucleotides
BWI76_RS13035: BWI76_RS13035 - MFS transporter, at 2,719,625 to 2,721,079
_RS13035
BWI76_RS13040: BWI76_RS13040 - transcriptional regulator, at 2,721,182 to 2,721,985
_RS13040
BWI76_RS13045: BWI76_RS13045 - hypothetical protein, at 2,722,147 to 2,722,542
_RS13045
BWI76_RS13050: BWI76_RS13050 - transcriptional regulator, at 2,722,691 to 2,723,125
_RS13050
Position (kb)
2721
2722 Strain fitness (log2 ratio)
-2
-1
0
1 at 2720.199 kb on + strand, within BWI76_RS13035 at 2720.226 kb on - strand, within BWI76_RS13035 at 2720.226 kb on - strand, within BWI76_RS13035 at 2720.354 kb on + strand, within BWI76_RS13035 at 2720.354 kb on + strand, within BWI76_RS13035 at 2720.369 kb on + strand, within BWI76_RS13035 at 2720.377 kb on - strand at 2720.377 kb on - strand, within BWI76_RS13035 at 2720.403 kb on + strand, within BWI76_RS13035 at 2720.444 kb on + strand, within BWI76_RS13035 at 2720.452 kb on - strand, within BWI76_RS13035 at 2720.611 kb on + strand, within BWI76_RS13035 at 2720.611 kb on + strand, within BWI76_RS13035 at 2720.619 kb on - strand, within BWI76_RS13035 at 2720.619 kb on - strand, within BWI76_RS13035 at 2720.699 kb on + strand, within BWI76_RS13035 at 2720.783 kb on - strand, within BWI76_RS13035 at 2720.793 kb on - strand, within BWI76_RS13035 at 2720.934 kb on - strand at 2720.934 kb on - strand at 2721.055 kb on + strand at 2721.094 kb on + strand at 2721.645 kb on - strand, within BWI76_RS13040 at 2721.696 kb on + strand, within BWI76_RS13040 at 2721.718 kb on - strand, within BWI76_RS13040 at 2721.776 kb on - strand, within BWI76_RS13040 at 2722.076 kb on - strand at 2722.084 kb on + strand at 2722.193 kb on - strand, within BWI76_RS13045 at 2722.193 kb on - strand, within BWI76_RS13045 at 2722.350 kb on - strand, within BWI76_RS13045 at 2722.350 kb on - strand, within BWI76_RS13045 at 2722.356 kb on + strand, within BWI76_RS13045 at 2722.393 kb on + strand, within BWI76_RS13045 at 2722.416 kb on - strand, within BWI76_RS13045 at 2722.472 kb on - strand, within BWI76_RS13045 at 2722.590 kb on + strand at 2722.672 kb on + strand at 2722.673 kb on + strand at 2722.701 kb on + strand at 2722.920 kb on - strand, within BWI76_RS13050
Per-strain Table
Position Strand Gene LocusTag Fraction K. M5a1 KLEB22 MOI 1 remove 2,720,199 + BWI76_RS13035 0.39 -0.2 2,720,226 - BWI76_RS13035 0.41 +0.6 2,720,226 - BWI76_RS13035 0.41 +0.4 2,720,354 + BWI76_RS13035 0.50 -0.6 2,720,354 + BWI76_RS13035 0.50 +0.3 2,720,369 + BWI76_RS13035 0.51 +0.2 2,720,377 - +1.1 2,720,377 - BWI76_RS13035 0.52 +0.2 2,720,403 + BWI76_RS13035 0.53 +0.7 2,720,444 + BWI76_RS13035 0.56 +0.5 2,720,452 - BWI76_RS13035 0.57 +0.8 2,720,611 + BWI76_RS13035 0.68 +0.2 2,720,611 + BWI76_RS13035 0.68 +0.1 2,720,619 - BWI76_RS13035 0.68 -0.3 2,720,619 - BWI76_RS13035 0.68 +0.3 2,720,699 + BWI76_RS13035 0.74 +0.4 2,720,783 - BWI76_RS13035 0.80 +1.7 2,720,793 - BWI76_RS13035 0.80 -0.1 2,720,934 - -0.4 2,720,934 - +0.3 2,721,055 + -0.7 2,721,094 + -0.8 2,721,645 - BWI76_RS13040 0.58 -1.2 2,721,696 + BWI76_RS13040 0.64 -0.4 2,721,718 - BWI76_RS13040 0.67 -0.6 2,721,776 - BWI76_RS13040 0.74 -0.1 2,722,076 - -0.3 2,722,084 + +0.7 2,722,193 - BWI76_RS13045 0.12 +0.1 2,722,193 - BWI76_RS13045 0.12 +0.3 2,722,350 - BWI76_RS13045 0.51 -1.3 2,722,350 - BWI76_RS13045 0.51 +0.7 2,722,356 + BWI76_RS13045 0.53 +0.1 2,722,393 + BWI76_RS13045 0.62 +1.2 2,722,416 - BWI76_RS13045 0.68 -0.1 2,722,472 - BWI76_RS13045 0.82 +1.5 2,722,590 + +0.2 2,722,672 + -0.3 2,722,673 + -1.9 2,722,701 + -1.0 2,722,920 - BWI76_RS13050 0.53 +0.2
Or see this region's nucleotide sequence