Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS12260
Experiment: K. M5a1 KLEB22 MOI 1
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | K. M5a1 KLEB22 MOI 1 |
---|---|---|---|---|---|
remove | |||||
2,561,446 | + | BWI76_RS12255 | 0.32 | -0.8 | |
2,561,446 | + | BWI76_RS12255 | 0.32 | -0.2 | |
2,561,454 | - | BWI76_RS12255 | 0.32 | -0.5 | |
2,561,477 | - | BWI76_RS12255 | 0.34 | +0.0 | |
2,561,650 | + | BWI76_RS12255 | 0.46 | -0.7 | |
2,561,717 | + | BWI76_RS12255 | 0.51 | -0.3 | |
2,561,783 | - | BWI76_RS12255 | 0.55 | +0.3 | |
2,561,784 | + | BWI76_RS12255 | 0.55 | +1.2 | |
2,561,794 | + | BWI76_RS12255 | 0.56 | -1.7 | |
2,562,083 | + | BWI76_RS12255 | 0.76 | +0.1 | |
2,562,083 | + | BWI76_RS12255 | 0.76 | -0.0 | |
2,562,091 | - | BWI76_RS12255 | 0.77 | -0.3 | |
2,562,382 | + | +0.5 | |||
2,562,390 | - | -0.5 | |||
2,562,390 | - | -2.1 | |||
2,562,607 | - | BWI76_RS12260 | 0.18 | -0.6 | |
2,562,931 | - | BWI76_RS12260 | 0.48 | -1.2 | |
2,563,018 | - | BWI76_RS12260 | 0.55 | +0.1 | |
2,563,113 | - | BWI76_RS12260 | 0.64 | -0.8 | |
2,563,173 | - | BWI76_RS12260 | 0.69 | -1.4 | |
2,563,459 | + | -0.1 | |||
2,563,729 | + | BWI76_RS12265 | 0.14 | +0.4 | |
2,563,737 | - | BWI76_RS12265 | 0.15 | -0.3 | |
2,563,917 | + | BWI76_RS12265 | 0.39 | +0.1 | |
2,563,917 | + | BWI76_RS12265 | 0.39 | -0.1 | |
2,563,917 | + | BWI76_RS12265 | 0.39 | +0.5 | |
2,563,969 | - | BWI76_RS12265 | 0.45 | -0.8 | |
2,564,325 | - | +0.2 | |||
2,564,464 | + | +0.0 |
Or see this region's nucleotide sequence