Experiment: K. M5a1 KLEB22 MOI 1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS09090 and BWI76_RS09095 are separated by 12 nucleotides BWI76_RS09095 and BWI76_RS09100 are separated by 37 nucleotides
BWI76_RS09090: BWI76_RS09090 - beta-aspartyl-peptidase, at 1,919,263 to 1,920,204
_RS09090
BWI76_RS09095: BWI76_RS09095 - glutathione ABC transporter ATP-binding protein GsiA, at 1,920,217 to 1,922,070
_RS09095
BWI76_RS09100: BWI76_RS09100 - glutathione ABC transporter substrate-binding protein GsiB, at 1,922,108 to 1,923,646
_RS09100
Position (kb)
1920
1921
1922
1923 Strain fitness (log2 ratio)
-1
0
1
2 at 1919.319 kb on + strand at 1919.343 kb on + strand at 1919.348 kb on - strand at 1919.353 kb on - strand at 1919.403 kb on - strand, within BWI76_RS09090 at 1919.416 kb on - strand, within BWI76_RS09090 at 1919.476 kb on - strand, within BWI76_RS09090 at 1919.975 kb on - strand, within BWI76_RS09090 at 1920.075 kb on + strand, within BWI76_RS09090 at 1920.158 kb on + strand at 1920.266 kb on + strand at 1920.323 kb on + strand at 1920.821 kb on - strand, within BWI76_RS09095 at 1921.004 kb on + strand, within BWI76_RS09095 at 1921.037 kb on + strand, within BWI76_RS09095 at 1921.045 kb on - strand, within BWI76_RS09095 at 1921.088 kb on + strand, within BWI76_RS09095 at 1921.154 kb on + strand, within BWI76_RS09095 at 1921.255 kb on + strand, within BWI76_RS09095 at 1921.436 kb on - strand, within BWI76_RS09095 at 1921.998 kb on - strand at 1922.048 kb on + strand at 1922.112 kb on - strand at 1922.267 kb on + strand, within BWI76_RS09100 at 1922.338 kb on + strand, within BWI76_RS09100 at 1922.340 kb on + strand, within BWI76_RS09100 at 1922.373 kb on - strand, within BWI76_RS09100 at 1922.390 kb on + strand, within BWI76_RS09100 at 1922.482 kb on + strand, within BWI76_RS09100 at 1922.996 kb on - strand, within BWI76_RS09100
Per-strain Table
Position Strand Gene LocusTag Fraction K. M5a1 KLEB22 MOI 1 remove 1,919,319 + +0.2 1,919,343 + +0.9 1,919,348 - -0.6 1,919,353 - +0.0 1,919,403 - BWI76_RS09090 0.15 -0.0 1,919,416 - BWI76_RS09090 0.16 -1.1 1,919,476 - BWI76_RS09090 0.23 +0.3 1,919,975 - BWI76_RS09090 0.76 -0.1 1,920,075 + BWI76_RS09090 0.86 -0.1 1,920,158 + +0.3 1,920,266 + -0.6 1,920,323 + -0.2 1,920,821 - BWI76_RS09095 0.33 -0.1 1,921,004 + BWI76_RS09095 0.42 +1.5 1,921,037 + BWI76_RS09095 0.44 -0.3 1,921,045 - BWI76_RS09095 0.45 -0.4 1,921,088 + BWI76_RS09095 0.47 +0.8 1,921,154 + BWI76_RS09095 0.51 +2.4 1,921,255 + BWI76_RS09095 0.56 +0.8 1,921,436 - BWI76_RS09095 0.66 +0.1 1,921,998 - -0.8 1,922,048 + +0.1 1,922,112 - -0.4 1,922,267 + BWI76_RS09100 0.10 -0.0 1,922,338 + BWI76_RS09100 0.15 -0.0 1,922,340 + BWI76_RS09100 0.15 +1.3 1,922,373 - BWI76_RS09100 0.17 -0.1 1,922,390 + BWI76_RS09100 0.18 +0.5 1,922,482 + BWI76_RS09100 0.24 +0.4 1,922,996 - BWI76_RS09100 0.58 +0.1
Or see this region's nucleotide sequence