Experiment: K. M5a1 KLEB22 MOI 1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS06245 and BWI76_RS06250 are separated by 152 nucleotides BWI76_RS06250 and BWI76_RS06255 overlap by 4 nucleotides
BWI76_RS06245: BWI76_RS06245 - proline-specific permease ProY, at 1,311,605 to 1,312,975
_RS06245
BWI76_RS06250: BWI76_RS06250 - alpha-glycosidase, at 1,313,128 to 1,314,945
_RS06250
BWI76_RS06255: BWI76_RS06255 - LysR family transcriptional regulator, at 1,314,942 to 1,315,844
_RS06255
Position (kb)
1313
1314
1315 Strain fitness (log2 ratio)
-1
0
1
2 at 1312.316 kb on - strand, within BWI76_RS06245 at 1312.316 kb on - strand, within BWI76_RS06245 at 1312.472 kb on + strand, within BWI76_RS06245 at 1312.971 kb on - strand at 1313.071 kb on + strand at 1313.089 kb on + strand at 1313.123 kb on - strand at 1313.145 kb on + strand at 1313.556 kb on + strand at 1313.584 kb on + strand, within BWI76_RS06250 at 1313.584 kb on + strand, within BWI76_RS06250 at 1314.354 kb on + strand, within BWI76_RS06250 at 1314.639 kb on - strand, within BWI76_RS06250 at 1314.924 kb on - strand at 1314.946 kb on + strand at 1314.954 kb on - strand at 1315.004 kb on - strand at 1315.134 kb on + strand, within BWI76_RS06255 at 1315.461 kb on - strand, within BWI76_RS06255 at 1315.462 kb on - strand, within BWI76_RS06255 at 1315.477 kb on - strand, within BWI76_RS06255 at 1315.569 kb on + strand, within BWI76_RS06255 at 1315.708 kb on - strand, within BWI76_RS06255 at 1315.710 kb on - strand, within BWI76_RS06255 at 1315.735 kb on + strand, within BWI76_RS06255 at 1315.748 kb on - strand, within BWI76_RS06255 at 1315.753 kb on - strand, within BWI76_RS06255 at 1315.824 kb on + strand at 1315.825 kb on + strand at 1315.825 kb on + strand at 1315.826 kb on + strand at 1315.826 kb on + strand at 1315.826 kb on + strand at 1315.826 kb on + strand at 1315.826 kb on + strand at 1315.826 kb on + strand at 1315.831 kb on + strand at 1315.833 kb on + strand at 1315.833 kb on - strand at 1315.833 kb on - strand at 1315.834 kb on - strand at 1315.834 kb on - strand at 1315.834 kb on - strand at 1315.834 kb on - strand at 1315.834 kb on - strand at 1315.834 kb on - strand at 1315.841 kb on - strand at 1315.841 kb on - strand at 1315.841 kb on - strand at 1315.841 kb on - strand at 1315.841 kb on - strand at 1315.847 kb on + strand at 1315.870 kb on + strand at 1315.871 kb on - strand at 1315.878 kb on - strand at 1315.894 kb on + strand at 1315.894 kb on + strand at 1315.894 kb on + strand at 1315.894 kb on + strand at 1315.894 kb on + strand at 1315.894 kb on + strand at 1315.894 kb on + strand at 1315.894 kb on + strand at 1315.902 kb on - strand at 1315.902 kb on - strand at 1315.902 kb on - strand at 1315.902 kb on - strand at 1315.902 kb on - strand at 1315.902 kb on - strand at 1315.902 kb on - strand at 1315.902 kb on - strand at 1315.902 kb on - strand at 1315.902 kb on - strand at 1315.902 kb on - strand at 1315.902 kb on - strand at 1315.902 kb on - strand at 1315.902 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction K. M5a1 KLEB22 MOI 1 remove 1,312,316 - BWI76_RS06245 0.52 +0.5 1,312,316 - BWI76_RS06245 0.52 +0.0 1,312,472 + BWI76_RS06245 0.63 +0.0 1,312,971 - -0.2 1,313,071 + +1.0 1,313,089 + -0.5 1,313,123 - +1.0 1,313,145 + +1.8 1,313,556 + -1.0 1,313,584 + BWI76_RS06250 0.25 -0.1 1,313,584 + BWI76_RS06250 0.25 -1.0 1,314,354 + BWI76_RS06250 0.67 +0.0 1,314,639 - BWI76_RS06250 0.83 -1.5 1,314,924 - +0.5 1,314,946 + +0.3 1,314,954 - +0.1 1,315,004 - +0.1 1,315,134 + BWI76_RS06255 0.21 +0.3 1,315,461 - BWI76_RS06255 0.57 -1.1 1,315,462 - BWI76_RS06255 0.58 +0.1 1,315,477 - BWI76_RS06255 0.59 +0.7 1,315,569 + BWI76_RS06255 0.69 +0.5 1,315,708 - BWI76_RS06255 0.85 -0.2 1,315,710 - BWI76_RS06255 0.85 +1.9 1,315,735 + BWI76_RS06255 0.88 -0.6 1,315,748 - BWI76_RS06255 0.89 +0.3 1,315,753 - BWI76_RS06255 0.90 +0.7 1,315,824 + +0.2 1,315,825 + -1.4 1,315,825 + -0.1 1,315,826 + +0.8 1,315,826 + +0.5 1,315,826 + -0.3 1,315,826 + +0.7 1,315,826 + +1.6 1,315,826 + -0.1 1,315,831 + +0.3 1,315,833 + -1.4 1,315,833 - -0.2 1,315,833 - +0.5 1,315,834 - +1.1 1,315,834 - -0.4 1,315,834 - -0.6 1,315,834 - +0.1 1,315,834 - -1.0 1,315,834 - -0.1 1,315,841 - +2.2 1,315,841 - -1.0 1,315,841 - -0.3 1,315,841 - +0.6 1,315,841 - -0.8 1,315,847 + -0.0 1,315,870 + -0.4 1,315,871 - -0.9 1,315,878 - -0.1 1,315,894 + +0.1 1,315,894 + +0.7 1,315,894 + -0.0 1,315,894 + +0.6 1,315,894 + +0.8 1,315,894 + +0.5 1,315,894 + -0.2 1,315,894 + -0.0 1,315,902 - -1.2 1,315,902 - +0.9 1,315,902 - -1.2 1,315,902 - +1.2 1,315,902 - +0.2 1,315,902 - +0.9 1,315,902 - +0.4 1,315,902 - +0.8 1,315,902 - +0.9 1,315,902 - +0.9 1,315,902 - +1.2 1,315,902 - +1.1 1,315,902 - -0.2 1,315,902 - +0.4
Or see this region's nucleotide sequence