Experiment: K. M5a1 KLEB22 MOI 1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS06065 and BWI76_RS06070 are separated by 11 nucleotides BWI76_RS06070 and BWI76_RS06075 overlap by 4 nucleotides BWI76_RS06075 and BWI76_RS06080 overlap by 4 nucleotides BWI76_RS06080 and BWI76_RS06085 are separated by 82 nucleotides
BWI76_RS06065: BWI76_RS06065 - taurine ABC transporter substrate-binding protein, at 1,274,898 to 1,275,860
_RS06065
BWI76_RS06070: BWI76_RS06070 - taurine transporter ATP-binding subunit, at 1,275,872 to 1,276,639
_RS06070
BWI76_RS06075: BWI76_RS06075 - taurine transporter subunit, at 1,276,636 to 1,277,463
_RS06075
BWI76_RS06080: BWI76_RS06080 - taurine dioxygenase, at 1,277,460 to 1,278,311
_RS06080
BWI76_RS06085: BWI76_RS06085 - hypothetical protein, at 1,278,394 to 1,280,112
_RS06085
Position (kb) 1276
1277
1278 Strain fitness (log2 ratio) -1
0
1
2 at 1275.767 kb on + strand at 1276.057 kb on - strand, within BWI76_RS06070 at 1276.071 kb on - strand, within BWI76_RS06070 at 1276.071 kb on - strand, within BWI76_RS06070 at 1276.143 kb on - strand, within BWI76_RS06070 at 1276.221 kb on + strand, within BWI76_RS06070 at 1276.606 kb on - strand at 1276.708 kb on + strand at 1276.735 kb on + strand, within BWI76_RS06075 at 1277.315 kb on + strand, within BWI76_RS06075 at 1277.902 kb on - strand, within BWI76_RS06080 at 1278.216 kb on + strand, within BWI76_RS06080 at 1278.224 kb on - strand, within BWI76_RS06080 at 1278.257 kb on + strand at 1278.460 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction K. M5a1 KLEB22 MOI 1 remove 1,275,767 + +0.2 1,276,057 - BWI76_RS06070 0.24 -0.6 1,276,071 - BWI76_RS06070 0.26 +1.2 1,276,071 - BWI76_RS06070 0.26 -0.1 1,276,143 - BWI76_RS06070 0.35 -0.6 1,276,221 + BWI76_RS06070 0.45 +2.4 1,276,606 - +0.2 1,276,708 + -0.2 1,276,735 + BWI76_RS06075 0.12 -0.3 1,277,315 + BWI76_RS06075 0.82 -1.2 1,277,902 - BWI76_RS06080 0.52 -0.1 1,278,216 + BWI76_RS06080 0.89 -0.1 1,278,224 - BWI76_RS06080 0.90 +0.6 1,278,257 + -0.1 1,278,460 + -0.4
Or see this region's nucleotide sequence