Experiment: K. M5a1 KLEB23 MOI 0.1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS24400 and BWI76_RS24405 are separated by 169 nucleotides BWI76_RS24405 and BWI76_RS24410 are separated by 5 nucleotides
BWI76_RS24400: BWI76_RS24400 - outer membrane channel protein TolC, at 5,085,527 to 5,086,975
_RS24400
BWI76_RS24405: BWI76_RS24405 - hypothetical protein, at 5,087,145 to 5,087,813
_RS24405
BWI76_RS24410: BWI76_RS24410 - putative glutathione-like synthetase, at 5,087,819 to 5,088,979
_RS24410
Position (kb)
5087
5088 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 5086.236 kb on - strand, within BWI76_RS24400 at 5086.322 kb on - strand, within BWI76_RS24400 at 5086.391 kb on - strand, within BWI76_RS24400 at 5086.435 kb on - strand, within BWI76_RS24400 at 5086.527 kb on - strand, within BWI76_RS24400 at 5086.532 kb on + strand, within BWI76_RS24400 at 5086.542 kb on - strand, within BWI76_RS24400 at 5086.563 kb on + strand, within BWI76_RS24400 at 5086.633 kb on - strand, within BWI76_RS24400 at 5086.719 kb on - strand, within BWI76_RS24400 at 5086.719 kb on - strand, within BWI76_RS24400 at 5086.719 kb on - strand, within BWI76_RS24400 at 5086.961 kb on - strand at 5087.005 kb on + strand at 5087.037 kb on - strand at 5087.037 kb on - strand at 5087.092 kb on + strand at 5087.095 kb on - strand at 5087.100 kb on - strand at 5087.323 kb on + strand, within BWI76_RS24405 at 5087.343 kb on + strand, within BWI76_RS24405 at 5087.343 kb on + strand, within BWI76_RS24405 at 5087.351 kb on - strand, within BWI76_RS24405 at 5087.405 kb on - strand, within BWI76_RS24405 at 5087.579 kb on - strand, within BWI76_RS24405 at 5087.644 kb on + strand, within BWI76_RS24405 at 5087.649 kb on + strand, within BWI76_RS24405 at 5087.711 kb on - strand, within BWI76_RS24405 at 5087.768 kb on - strand at 5087.973 kb on + strand, within BWI76_RS24410 at 5087.973 kb on + strand, within BWI76_RS24410 at 5088.138 kb on + strand, within BWI76_RS24410 at 5088.405 kb on - strand, within BWI76_RS24410 at 5088.555 kb on - strand, within BWI76_RS24410 at 5088.642 kb on - strand, within BWI76_RS24410 at 5088.728 kb on + strand, within BWI76_RS24410
Per-strain Table
Position Strand Gene LocusTag Fraction K. M5a1 KLEB23 MOI 0.1 remove 5,086,236 - BWI76_RS24400 0.49 -2.5 5,086,322 - BWI76_RS24400 0.55 -1.1 5,086,391 - BWI76_RS24400 0.60 +1.5 5,086,435 - BWI76_RS24400 0.63 +1.1 5,086,527 - BWI76_RS24400 0.69 -0.4 5,086,532 + BWI76_RS24400 0.69 -0.9 5,086,542 - BWI76_RS24400 0.70 -1.5 5,086,563 + BWI76_RS24400 0.71 +1.3 5,086,633 - BWI76_RS24400 0.76 -0.5 5,086,719 - BWI76_RS24400 0.82 -0.5 5,086,719 - BWI76_RS24400 0.82 +2.1 5,086,719 - BWI76_RS24400 0.82 -1.1 5,086,961 - +0.7 5,087,005 + -1.1 5,087,037 - -0.8 5,087,037 - +1.0 5,087,092 + -0.2 5,087,095 - +0.3 5,087,100 - +1.0 5,087,323 + BWI76_RS24405 0.27 +1.0 5,087,343 + BWI76_RS24405 0.30 -0.6 5,087,343 + BWI76_RS24405 0.30 -0.2 5,087,351 - BWI76_RS24405 0.31 -1.1 5,087,405 - BWI76_RS24405 0.39 -1.5 5,087,579 - BWI76_RS24405 0.65 -2.7 5,087,644 + BWI76_RS24405 0.75 -0.1 5,087,649 + BWI76_RS24405 0.75 -0.6 5,087,711 - BWI76_RS24405 0.85 -3.0 5,087,768 - +0.5 5,087,973 + BWI76_RS24410 0.13 -0.1 5,087,973 + BWI76_RS24410 0.13 -0.3 5,088,138 + BWI76_RS24410 0.27 -0.2 5,088,405 - BWI76_RS24410 0.50 -1.2 5,088,555 - BWI76_RS24410 0.63 -0.6 5,088,642 - BWI76_RS24410 0.71 +0.5 5,088,728 + BWI76_RS24410 0.78 -0.3
Or see this region's nucleotide sequence