Experiment: K. M5a1 KLEB23 MOI 0.1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS21250 and BWI76_RS21255 overlap by 14 nucleotides BWI76_RS21255 and BWI76_RS21260 are separated by 13 nucleotides BWI76_RS21260 and BWI76_RS21265 are separated by 545 nucleotides
BWI76_RS21250: BWI76_RS21250 - two-component system response regulator GlrR, at 4,448,887 to 4,450,224
_RS21250
BWI76_RS21255: BWI76_RS21255 - hypothetical protein, at 4,450,211 to 4,450,915
_RS21255
BWI76_RS21260: BWI76_RS21260 - two-component sensor histidine kinase, at 4,450,929 to 4,452,383
_RS21260
BWI76_RS21265: BWI76_RS21265 - phosphoribosylformylglycinamidine synthase, at 4,452,929 to 4,456,816
_RS21265
Position (kb)
4450
4451
4452
4453 Strain fitness (log2 ratio)
-1
0
1 at 4449.962 kb on - strand, within BWI76_RS21250 at 4449.962 kb on - strand, within BWI76_RS21250 at 4450.023 kb on + strand, within BWI76_RS21250 at 4450.055 kb on + strand, within BWI76_RS21250 at 4450.420 kb on - strand, within BWI76_RS21255 at 4450.468 kb on - strand, within BWI76_RS21255 at 4450.473 kb on + strand, within BWI76_RS21255 at 4450.481 kb on - strand at 4450.524 kb on - strand, within BWI76_RS21255 at 4450.689 kb on + strand, within BWI76_RS21255 at 4451.054 kb on + strand at 4451.054 kb on + strand at 4451.054 kb on + strand at 4451.062 kb on - strand at 4451.088 kb on - strand, within BWI76_RS21260 at 4451.483 kb on - strand, within BWI76_RS21260 at 4451.546 kb on + strand, within BWI76_RS21260 at 4451.694 kb on + strand, within BWI76_RS21260 at 4451.920 kb on - strand, within BWI76_RS21260 at 4451.953 kb on - strand, within BWI76_RS21260 at 4452.104 kb on + strand, within BWI76_RS21260 at 4452.111 kb on - strand, within BWI76_RS21260 at 4452.156 kb on - strand, within BWI76_RS21260 at 4452.251 kb on + strand at 4452.528 kb on + strand at 4452.940 kb on + strand at 4453.142 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction K. M5a1 KLEB23 MOI 0.1 remove 4,449,962 - BWI76_RS21250 0.80 -0.6 4,449,962 - BWI76_RS21250 0.80 -0.3 4,450,023 + BWI76_RS21250 0.85 -0.4 4,450,055 + BWI76_RS21250 0.87 -0.0 4,450,420 - BWI76_RS21255 0.30 -0.5 4,450,468 - BWI76_RS21255 0.36 -0.6 4,450,473 + BWI76_RS21255 0.37 -0.1 4,450,481 - +1.4 4,450,524 - BWI76_RS21255 0.44 +1.0 4,450,689 + BWI76_RS21255 0.68 -0.0 4,451,054 + -0.4 4,451,054 + +0.0 4,451,054 + -0.0 4,451,062 - +0.8 4,451,088 - BWI76_RS21260 0.11 -0.7 4,451,483 - BWI76_RS21260 0.38 -0.6 4,451,546 + BWI76_RS21260 0.42 -0.8 4,451,694 + BWI76_RS21260 0.53 -0.1 4,451,920 - BWI76_RS21260 0.68 -0.6 4,451,953 - BWI76_RS21260 0.70 -1.3 4,452,104 + BWI76_RS21260 0.81 -0.3 4,452,111 - BWI76_RS21260 0.81 -0.8 4,452,156 - BWI76_RS21260 0.84 -0.1 4,452,251 + -0.5 4,452,528 + -0.4 4,452,940 + -0.3 4,453,142 + -0.3
Or see this region's nucleotide sequence