Experiment: K. M5a1 KLEB23 MOI 0.1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS17765 and BWI76_RS17770 are separated by 94 nucleotides BWI76_RS17770 and BWI76_RS17775 are separated by 16 nucleotides BWI76_RS17775 and BWI76_RS17780 are separated by 126 nucleotides BWI76_RS17780 and BWI76_RS17785 are separated by 23 nucleotides
BWI76_RS17765: BWI76_RS17765 - hypothetical protein, at 3,694,431 to 3,694,877
_RS17765
BWI76_RS17770: BWI76_RS17770 - isomerase/hydrolase, at 3,694,972 to 3,695,631
_RS17770
BWI76_RS17775: BWI76_RS17775 - hypothetical protein, at 3,695,648 to 3,695,929
_RS17775
BWI76_RS17780: BWI76_RS17780 - septum formation inhibitor, at 3,696,056 to 3,696,754
_RS17780
BWI76_RS17785: BWI76_RS17785 - septum site-determining protein MinD, at 3,696,778 to 3,697,590
_RS17785
Position (kb)
3695
3696 Strain fitness (log2 ratio)
-2
-1
0
1 at 3694.655 kb on - strand, within BWI76_RS17765 at 3694.948 kb on + strand at 3694.977 kb on + strand at 3695.186 kb on - strand, within BWI76_RS17770 at 3695.420 kb on + strand, within BWI76_RS17770 at 3695.614 kb on + strand at 3695.614 kb on + strand at 3695.614 kb on + strand at 3695.646 kb on - strand at 3695.668 kb on + strand at 3695.721 kb on + strand, within BWI76_RS17775 at 3695.821 kb on + strand, within BWI76_RS17775 at 3695.966 kb on + strand at 3695.968 kb on + strand at 3695.968 kb on + strand at 3695.976 kb on - strand at 3696.017 kb on - strand at 3696.043 kb on + strand at 3696.089 kb on + strand at 3696.097 kb on - strand at 3696.200 kb on - strand, within BWI76_RS17780 at 3696.379 kb on + strand, within BWI76_RS17780 at 3696.456 kb on + strand, within BWI76_RS17780 at 3696.474 kb on - strand, within BWI76_RS17780 at 3696.544 kb on + strand, within BWI76_RS17780 at 3696.720 kb on - strand at 3696.851 kb on - strand at 3696.914 kb on - strand, within BWI76_RS17785
Per-strain Table
Position Strand Gene LocusTag Fraction K. M5a1 KLEB23 MOI 0.1 remove 3,694,655 - BWI76_RS17765 0.50 +0.2 3,694,948 + -0.1 3,694,977 + +0.5 3,695,186 - BWI76_RS17770 0.32 -0.3 3,695,420 + BWI76_RS17770 0.68 -1.0 3,695,614 + -0.4 3,695,614 + -0.9 3,695,614 + -0.0 3,695,646 - -0.4 3,695,668 + -2.4 3,695,721 + BWI76_RS17775 0.26 -1.0 3,695,821 + BWI76_RS17775 0.61 -0.5 3,695,966 + -1.0 3,695,968 + -0.0 3,695,968 + +0.8 3,695,976 - -0.1 3,696,017 - -0.1 3,696,043 + +0.1 3,696,089 + +0.3 3,696,097 - +1.3 3,696,200 - BWI76_RS17780 0.21 +1.0 3,696,379 + BWI76_RS17780 0.46 -1.1 3,696,456 + BWI76_RS17780 0.57 +0.2 3,696,474 - BWI76_RS17780 0.60 -1.7 3,696,544 + BWI76_RS17780 0.70 +0.5 3,696,720 - +0.5 3,696,851 - -1.5 3,696,914 - BWI76_RS17785 0.17 +0.2
Or see this region's nucleotide sequence