Experiment: K. M5a1 KLEB23 MOI 0.1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS17295 and BWI76_RS17300 are separated by 35 nucleotides BWI76_RS17300 and BWI76_RS17310 are separated by 282 nucleotides BWI76_RS17310 and BWI76_RS17315 are separated by 107 nucleotides BWI76_RS17315 and BWI76_RS17320 overlap by 4 nucleotides BWI76_RS17320 and BWI76_RS17325 overlap by 1 nucleotides
BWI76_RS17295: BWI76_RS17295 - tRNA-Tyr, at 3,583,462 to 3,583,546
_RS17295
BWI76_RS17300: BWI76_RS17300 - tRNA-Tyr, at 3,583,582 to 3,583,666
_RS17300
BWI76_RS17310: BWI76_RS17310 - AsnC family transcriptional regulator, at 3,583,949 to 3,584,392
_RS17310
BWI76_RS17315: BWI76_RS17315 - EamA family transporter, at 3,584,500 to 3,585,395
_RS17315
BWI76_RS17320: BWI76_RS17320 - respiratory nitrate reductase subunit gamma, at 3,585,392 to 3,586,069
_RS17320
BWI76_RS17325: BWI76_RS17325 - nitrate reductase molybdenum cofactor assembly chaperone, at 3,586,069 to 3,586,779
_RS17325
Position (kb)
3584
3585
3586 Strain fitness (log2 ratio)
-2
-1
0
1 at 3583.607 kb on - strand, within BWI76_RS17300 at 3583.622 kb on - strand, within BWI76_RS17300 at 3583.819 kb on + strand at 3583.905 kb on + strand at 3583.967 kb on + strand at 3584.037 kb on + strand, within BWI76_RS17310 at 3584.196 kb on + strand, within BWI76_RS17310 at 3584.209 kb on - strand, within BWI76_RS17310 at 3584.262 kb on - strand, within BWI76_RS17310 at 3584.262 kb on - strand, within BWI76_RS17310 at 3584.479 kb on - strand at 3584.626 kb on - strand, within BWI76_RS17315 at 3584.697 kb on + strand, within BWI76_RS17315 at 3584.793 kb on + strand, within BWI76_RS17315 at 3584.798 kb on + strand, within BWI76_RS17315 at 3584.801 kb on - strand, within BWI76_RS17315 at 3584.807 kb on - strand, within BWI76_RS17315 at 3585.328 kb on + strand at 3585.634 kb on + strand, within BWI76_RS17320 at 3585.852 kb on + strand, within BWI76_RS17320 at 3585.976 kb on - strand, within BWI76_RS17320
Per-strain Table
Position Strand Gene LocusTag Fraction K. M5a1 KLEB23 MOI 0.1 remove 3,583,607 - BWI76_RS17300 0.29 -1.2 3,583,622 - BWI76_RS17300 0.47 +0.7 3,583,819 + -0.3 3,583,905 + -1.1 3,583,967 + -0.6 3,584,037 + BWI76_RS17310 0.20 +0.6 3,584,196 + BWI76_RS17310 0.56 -0.6 3,584,209 - BWI76_RS17310 0.59 +0.1 3,584,262 - BWI76_RS17310 0.70 +1.7 3,584,262 - BWI76_RS17310 0.70 -0.8 3,584,479 - -0.5 3,584,626 - BWI76_RS17315 0.14 -0.7 3,584,697 + BWI76_RS17315 0.22 -0.4 3,584,793 + BWI76_RS17315 0.33 -0.5 3,584,798 + BWI76_RS17315 0.33 -0.6 3,584,801 - BWI76_RS17315 0.34 -2.0 3,584,807 - BWI76_RS17315 0.34 +1.2 3,585,328 + +0.1 3,585,634 + BWI76_RS17320 0.36 -0.5 3,585,852 + BWI76_RS17320 0.68 -0.7 3,585,976 - BWI76_RS17320 0.86 -0.4
Or see this region's nucleotide sequence