Experiment: K. M5a1 KLEB23 MOI 0.1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS06860 and BWI76_RS06865 are separated by 163 nucleotides BWI76_RS06865 and BWI76_RS06870 are separated by 115 nucleotides BWI76_RS06870 and BWI76_RS06875 are separated by 201 nucleotides
BWI76_RS06860: BWI76_RS06860 - MFS transporter, at 1,440,204 to 1,441,424
_RS06860
BWI76_RS06865: BWI76_RS06865 - bifunctional UDP-sugar hydrolase/5'-nucleotidase, at 1,441,588 to 1,443,240
_RS06865
BWI76_RS06870: BWI76_RS06870 - aminoacyl-tRNA deacylase, at 1,443,356 to 1,443,835
_RS06870
BWI76_RS06875: BWI76_RS06875 - conjugal transfer protein TraB, at 1,444,037 to 1,444,831
_RS06875
Position (kb)
1441
1442
1443
1444 Strain fitness (log2 ratio)
-2
-1
0
1 at 1440.769 kb on + strand, within BWI76_RS06860 at 1440.848 kb on + strand, within BWI76_RS06860 at 1440.991 kb on - strand, within BWI76_RS06860 at 1441.071 kb on + strand, within BWI76_RS06860 at 1441.117 kb on - strand, within BWI76_RS06860 at 1441.117 kb on - strand, within BWI76_RS06860 at 1441.124 kb on + strand, within BWI76_RS06860 at 1441.132 kb on - strand, within BWI76_RS06860 at 1441.132 kb on - strand, within BWI76_RS06860 at 1441.214 kb on + strand, within BWI76_RS06860 at 1441.217 kb on - strand at 1441.393 kb on + strand at 1441.393 kb on + strand at 1441.393 kb on + strand at 1441.398 kb on + strand at 1441.503 kb on - strand at 1441.773 kb on + strand, within BWI76_RS06865 at 1442.267 kb on + strand, within BWI76_RS06865 at 1442.695 kb on + strand, within BWI76_RS06865 at 1442.863 kb on + strand, within BWI76_RS06865 at 1442.886 kb on + strand, within BWI76_RS06865 at 1442.943 kb on + strand, within BWI76_RS06865 at 1443.032 kb on - strand, within BWI76_RS06865 at 1443.048 kb on + strand, within BWI76_RS06865 at 1443.169 kb on - strand at 1443.241 kb on + strand at 1443.249 kb on - strand at 1443.266 kb on + strand at 1443.478 kb on - strand, within BWI76_RS06870 at 1443.714 kb on + strand, within BWI76_RS06870 at 1443.721 kb on + strand, within BWI76_RS06870 at 1443.864 kb on - strand at 1443.881 kb on - strand at 1443.917 kb on + strand at 1444.180 kb on + strand, within BWI76_RS06875 at 1444.180 kb on + strand, within BWI76_RS06875 at 1444.188 kb on - strand, within BWI76_RS06875 at 1444.188 kb on - strand, within BWI76_RS06875 at 1444.188 kb on - strand, within BWI76_RS06875 at 1444.188 kb on - strand, within BWI76_RS06875 at 1444.188 kb on - strand, within BWI76_RS06875
Per-strain Table
Position Strand Gene LocusTag Fraction K. M5a1 KLEB23 MOI 0.1 remove 1,440,769 + BWI76_RS06860 0.46 -0.9 1,440,848 + BWI76_RS06860 0.53 -0.1 1,440,991 - BWI76_RS06860 0.64 +0.1 1,441,071 + BWI76_RS06860 0.71 -0.3 1,441,117 - BWI76_RS06860 0.75 -0.5 1,441,117 - BWI76_RS06860 0.75 -1.9 1,441,124 + BWI76_RS06860 0.75 +0.1 1,441,132 - BWI76_RS06860 0.76 -0.5 1,441,132 - BWI76_RS06860 0.76 -0.1 1,441,214 + BWI76_RS06860 0.83 +0.6 1,441,217 - -0.2 1,441,393 + +0.2 1,441,393 + +0.4 1,441,393 + -0.8 1,441,398 + +1.4 1,441,503 - -1.1 1,441,773 + BWI76_RS06865 0.11 -0.1 1,442,267 + BWI76_RS06865 0.41 -0.8 1,442,695 + BWI76_RS06865 0.67 -1.0 1,442,863 + BWI76_RS06865 0.77 -0.4 1,442,886 + BWI76_RS06865 0.79 -0.9 1,442,943 + BWI76_RS06865 0.82 +0.1 1,443,032 - BWI76_RS06865 0.87 +0.1 1,443,048 + BWI76_RS06865 0.88 -1.7 1,443,169 - -0.3 1,443,241 + -0.1 1,443,249 - +0.6 1,443,266 + -1.4 1,443,478 - BWI76_RS06870 0.25 +1.5 1,443,714 + BWI76_RS06870 0.75 -0.1 1,443,721 + BWI76_RS06870 0.76 +0.1 1,443,864 - +0.9 1,443,881 - +0.1 1,443,917 + +0.1 1,444,180 + BWI76_RS06875 0.18 -0.8 1,444,180 + BWI76_RS06875 0.18 -0.9 1,444,188 - BWI76_RS06875 0.19 +0.2 1,444,188 - BWI76_RS06875 0.19 +0.1 1,444,188 - BWI76_RS06875 0.19 +0.2 1,444,188 - BWI76_RS06875 0.19 -0.2 1,444,188 - BWI76_RS06875 0.19 +0.1
Or see this region's nucleotide sequence