Experiment: K. M5a1 KLEB23 MOI 0.1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS03110 and BWI76_RS03115 are separated by 172 nucleotides BWI76_RS03115 and BWI76_RS03120 are separated by 139 nucleotides
BWI76_RS03110: BWI76_RS03110 - MFS transporter, at 640,200 to 641,699
_RS03110
BWI76_RS03115: BWI76_RS03115 - ABC transporter substrate-binding protein, at 641,872 to 643,182
_RS03115
BWI76_RS03120: BWI76_RS03120 - ABC transporter ATP-binding protein, at 643,322 to 644,392
_RS03120
Position (kb) 641
642
643
644 Strain fitness (log2 ratio) -2
-1
0
1 at 640.894 kb on - strand, within BWI76_RS03110 at 640.981 kb on - strand, within BWI76_RS03110 at 641.008 kb on - strand, within BWI76_RS03110 at 641.063 kb on - strand, within BWI76_RS03110 at 641.076 kb on + strand, within BWI76_RS03110 at 641.076 kb on + strand, within BWI76_RS03110 at 641.076 kb on + strand, within BWI76_RS03110 at 641.084 kb on - strand, within BWI76_RS03110 at 641.153 kb on - strand, within BWI76_RS03110 at 641.313 kb on - strand, within BWI76_RS03110 at 641.494 kb on + strand, within BWI76_RS03110 at 641.585 kb on + strand at 641.590 kb on + strand at 641.694 kb on + strand at 641.702 kb on - strand at 641.702 kb on - strand at 641.702 kb on - strand at 641.702 kb on - strand at 641.724 kb on + strand at 641.802 kb on + strand at 642.018 kb on + strand, within BWI76_RS03115 at 642.064 kb on - strand, within BWI76_RS03115 at 642.075 kb on + strand, within BWI76_RS03115 at 642.093 kb on - strand, within BWI76_RS03115 at 642.134 kb on + strand, within BWI76_RS03115 at 642.246 kb on + strand, within BWI76_RS03115 at 642.254 kb on - strand, within BWI76_RS03115 at 642.264 kb on - strand, within BWI76_RS03115 at 642.365 kb on + strand, within BWI76_RS03115 at 642.570 kb on - strand, within BWI76_RS03115 at 642.648 kb on + strand, within BWI76_RS03115 at 642.687 kb on - strand, within BWI76_RS03115 at 642.773 kb on - strand, within BWI76_RS03115 at 642.859 kb on - strand, within BWI76_RS03115 at 642.867 kb on - strand, within BWI76_RS03115 at 642.984 kb on + strand, within BWI76_RS03115 at 643.062 kb on - strand at 643.079 kb on - strand at 643.137 kb on + strand at 643.137 kb on + strand at 643.137 kb on + strand at 643.137 kb on + strand at 643.137 kb on + strand at 643.145 kb on - strand at 643.145 kb on - strand at 643.145 kb on - strand at 643.145 kb on - strand at 643.145 kb on - strand at 643.149 kb on + strand at 643.237 kb on + strand at 643.237 kb on + strand at 643.245 kb on - strand at 643.458 kb on - strand, within BWI76_RS03120 at 643.468 kb on - strand, within BWI76_RS03120 at 643.562 kb on + strand, within BWI76_RS03120 at 643.628 kb on + strand, within BWI76_RS03120 at 643.736 kb on + strand, within BWI76_RS03120 at 643.744 kb on - strand, within BWI76_RS03120 at 643.827 kb on - strand, within BWI76_RS03120 at 644.049 kb on + strand, within BWI76_RS03120
Per-strain Table
Position Strand Gene LocusTag Fraction K. M5a1 KLEB23 MOI 0.1 remove 640,894 - BWI76_RS03110 0.46 -0.2 640,981 - BWI76_RS03110 0.52 +0.2 641,008 - BWI76_RS03110 0.54 +0.4 641,063 - BWI76_RS03110 0.58 -0.5 641,076 + BWI76_RS03110 0.58 -0.1 641,076 + BWI76_RS03110 0.58 -0.2 641,076 + BWI76_RS03110 0.58 -0.0 641,084 - BWI76_RS03110 0.59 +0.1 641,153 - BWI76_RS03110 0.64 +0.2 641,313 - BWI76_RS03110 0.74 -0.0 641,494 + BWI76_RS03110 0.86 +0.3 641,585 + -1.3 641,590 + +0.3 641,694 + +0.4 641,702 - -0.7 641,702 - +0.3 641,702 - +0.2 641,702 - +0.1 641,724 + -0.7 641,802 + -1.1 642,018 + BWI76_RS03115 0.11 -1.0 642,064 - BWI76_RS03115 0.15 -0.3 642,075 + BWI76_RS03115 0.15 -0.7 642,093 - BWI76_RS03115 0.17 -1.1 642,134 + BWI76_RS03115 0.20 -1.0 642,246 + BWI76_RS03115 0.29 -0.2 642,254 - BWI76_RS03115 0.29 -1.4 642,264 - BWI76_RS03115 0.30 +0.0 642,365 + BWI76_RS03115 0.38 -0.1 642,570 - BWI76_RS03115 0.53 -0.9 642,648 + BWI76_RS03115 0.59 +0.1 642,687 - BWI76_RS03115 0.62 +0.4 642,773 - BWI76_RS03115 0.69 -0.7 642,859 - BWI76_RS03115 0.75 -0.5 642,867 - BWI76_RS03115 0.76 -1.2 642,984 + BWI76_RS03115 0.85 -0.4 643,062 - -0.6 643,079 - -0.9 643,137 + +0.3 643,137 + +0.2 643,137 + -0.0 643,137 + +0.8 643,137 + -0.4 643,145 - +0.7 643,145 - -2.2 643,145 - -0.6 643,145 - -0.3 643,145 - -0.1 643,149 + -0.5 643,237 + -0.4 643,237 + -1.3 643,245 - +0.0 643,458 - BWI76_RS03120 0.13 -0.1 643,468 - BWI76_RS03120 0.14 -0.0 643,562 + BWI76_RS03120 0.22 +0.2 643,628 + BWI76_RS03120 0.29 +0.5 643,736 + BWI76_RS03120 0.39 +0.5 643,744 - BWI76_RS03120 0.39 -0.2 643,827 - BWI76_RS03120 0.47 +0.0 644,049 + BWI76_RS03120 0.68 -0.5
Or see this region's nucleotide sequence