Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS19135
Experiment: K. M5a1 KLEB23 MOI 1
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | K. M5a1 KLEB23 MOI 1 |
---|---|---|---|---|---|
remove | |||||
3,976,970 | - | -0.8 | |||
3,977,038 | - | +0.3 | |||
3,977,207 | - | BWI76_RS19130 | 0.28 | -0.0 | |
3,977,207 | - | BWI76_RS19130 | 0.28 | +1.1 | |
3,977,303 | - | BWI76_RS19130 | 0.39 | +2.5 | |
3,977,330 | + | BWI76_RS19130 | 0.42 | -1.3 | |
3,977,414 | - | BWI76_RS19130 | 0.52 | +1.9 | |
3,977,460 | - | BWI76_RS19130 | 0.57 | -0.7 | |
3,977,521 | - | BWI76_RS19130 | 0.65 | +0.7 | |
3,977,624 | - | BWI76_RS19130 | 0.77 | +0.5 | |
3,977,809 | - | +1.0 | |||
3,977,854 | + | +0.4 | |||
3,977,862 | - | +0.5 | |||
3,978,346 | - | BWI76_RS19135 | 0.29 | -0.4 | |
3,978,508 | + | BWI76_RS19135 | 0.41 | +1.1 | |
3,978,717 | + | BWI76_RS19135 | 0.56 | -0.1 | |
3,978,946 | - | BWI76_RS19135 | 0.73 | -2.9 | |
3,978,993 | - | BWI76_RS19135 | 0.77 | +0.6 | |
3,979,128 | - | BWI76_RS19135 | 0.87 | -1.1 | |
3,979,230 | - | -0.9 | |||
3,979,335 | + | -0.9 | |||
3,979,363 | + | -0.6 | |||
3,979,390 | + | -0.2 | |||
3,979,391 | - | -0.5 | |||
3,979,609 | + | BWI76_RS19140 | 0.13 | -1.2 | |
3,979,718 | - | BWI76_RS19140 | 0.22 | +1.5 | |
3,979,790 | + | BWI76_RS19140 | 0.27 | -0.2 | |
3,979,890 | - | BWI76_RS19140 | 0.35 | -0.6 | |
3,980,306 | + | BWI76_RS19140 | 0.68 | +0.8 |
Or see this region's nucleotide sequence