Experiment: K. M5a1 KLEB23 MOI 1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS16730 and BWI76_RS16735 are separated by 809 nucleotides BWI76_RS16735 and BWI76_RS16740 are separated by 48 nucleotides
BWI76_RS16730: BWI76_RS16730 - cystathionine gamma-lyase, at 3,465,235 to 3,466,422
_RS16730
BWI76_RS16735: BWI76_RS16735 - cold-shock protein, at 3,467,232 to 3,467,444
_RS16735
BWI76_RS16740: BWI76_RS16740 - transcriptional regulator, at 3,467,493 to 3,468,365
_RS16740
Position (kb)
3467
3468 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3466.233 kb on + strand, within BWI76_RS16730 at 3466.240 kb on + strand, within BWI76_RS16730 at 3466.247 kb on + strand, within BWI76_RS16730 at 3466.247 kb on + strand, within BWI76_RS16730 at 3466.255 kb on + strand, within BWI76_RS16730 at 3466.255 kb on - strand, within BWI76_RS16730 at 3466.255 kb on - strand, within BWI76_RS16730 at 3466.255 kb on - strand, within BWI76_RS16730 at 3466.259 kb on + strand, within BWI76_RS16730 at 3466.267 kb on - strand, within BWI76_RS16730 at 3466.269 kb on + strand, within BWI76_RS16730 at 3466.292 kb on + strand, within BWI76_RS16730 at 3466.292 kb on + strand, within BWI76_RS16730 at 3466.292 kb on + strand, within BWI76_RS16730 at 3466.485 kb on - strand at 3466.498 kb on - strand at 3466.569 kb on - strand at 3466.757 kb on + strand at 3466.763 kb on + strand at 3466.776 kb on - strand at 3466.791 kb on + strand at 3466.799 kb on - strand at 3466.819 kb on + strand at 3466.837 kb on - strand at 3466.853 kb on + strand at 3466.861 kb on + strand at 3466.861 kb on + strand at 3466.869 kb on + strand at 3466.945 kb on + strand at 3466.947 kb on + strand at 3466.963 kb on - strand at 3466.963 kb on - strand at 3466.963 kb on - strand at 3466.964 kb on + strand at 3466.964 kb on + strand at 3466.965 kb on - strand at 3466.969 kb on + strand at 3466.969 kb on + strand at 3466.969 kb on + strand at 3466.972 kb on - strand at 3466.977 kb on - strand at 3467.021 kb on + strand at 3467.029 kb on - strand at 3467.031 kb on - strand at 3467.073 kb on + strand at 3467.080 kb on - strand at 3467.184 kb on - strand at 3467.191 kb on + strand at 3467.199 kb on - strand at 3467.199 kb on - strand at 3467.199 kb on - strand at 3467.201 kb on - strand at 3467.201 kb on - strand at 3467.286 kb on + strand, within BWI76_RS16735 at 3467.366 kb on - strand, within BWI76_RS16735 at 3467.368 kb on + strand, within BWI76_RS16735 at 3467.404 kb on - strand, within BWI76_RS16735 at 3467.406 kb on + strand, within BWI76_RS16735 at 3467.542 kb on - strand at 3467.583 kb on - strand, within BWI76_RS16740 at 3467.764 kb on - strand, within BWI76_RS16740 at 3468.038 kb on + strand, within BWI76_RS16740 at 3468.038 kb on + strand, within BWI76_RS16740 at 3468.205 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction K. M5a1 KLEB23 MOI 1 remove 3,466,233 + BWI76_RS16730 0.84 -0.3 3,466,240 + BWI76_RS16730 0.85 -1.2 3,466,247 + BWI76_RS16730 0.85 +1.4 3,466,247 + BWI76_RS16730 0.85 -0.2 3,466,255 + BWI76_RS16730 0.86 -0.2 3,466,255 - BWI76_RS16730 0.86 -1.8 3,466,255 - BWI76_RS16730 0.86 +1.1 3,466,255 - BWI76_RS16730 0.86 +2.1 3,466,259 + BWI76_RS16730 0.86 +2.7 3,466,267 - BWI76_RS16730 0.87 -2.3 3,466,269 + BWI76_RS16730 0.87 +0.6 3,466,292 + BWI76_RS16730 0.89 -2.5 3,466,292 + BWI76_RS16730 0.89 +0.1 3,466,292 + BWI76_RS16730 0.89 -1.7 3,466,485 - -0.3 3,466,498 - -0.4 3,466,569 - +0.5 3,466,757 + +0.2 3,466,763 + +2.6 3,466,776 - +1.6 3,466,791 + +1.0 3,466,799 - -0.2 3,466,819 + -0.7 3,466,837 - +0.9 3,466,853 + -2.6 3,466,861 + -1.4 3,466,861 + +1.7 3,466,869 + -1.0 3,466,945 + -0.5 3,466,947 + +0.8 3,466,963 - -0.6 3,466,963 - +0.1 3,466,963 - +1.1 3,466,964 + +0.8 3,466,964 + -2.4 3,466,965 - +0.6 3,466,969 + -1.0 3,466,969 + -0.2 3,466,969 + +2.1 3,466,972 - -1.0 3,466,977 - +2.3 3,467,021 + +0.5 3,467,029 - -0.4 3,467,031 - -0.2 3,467,073 + -0.5 3,467,080 - +0.6 3,467,184 - -0.4 3,467,191 + -2.7 3,467,199 - +0.4 3,467,199 - -1.5 3,467,199 - +1.1 3,467,201 - +0.2 3,467,201 - -2.5 3,467,286 + BWI76_RS16735 0.25 -2.3 3,467,366 - BWI76_RS16735 0.63 +0.9 3,467,368 + BWI76_RS16735 0.64 -2.8 3,467,404 - BWI76_RS16735 0.81 -0.1 3,467,406 + BWI76_RS16735 0.82 +0.2 3,467,542 - -1.7 3,467,583 - BWI76_RS16740 0.10 -1.0 3,467,764 - BWI76_RS16740 0.31 +0.7 3,468,038 + BWI76_RS16740 0.62 -1.0 3,468,038 + BWI76_RS16740 0.62 -0.3 3,468,205 - -1.0
Or see this region's nucleotide sequence