Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS12400

Experiment: K. M5a1 KLEB23 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	K. M5a1 KLEB23 MOI 1
2,588,994	-				+0.1
2,589,188	-		BWI76_RS12395	0.27	-1.9
2,589,353	+		BWI76_RS12395	0.44	+0.2
2,589,381	-		BWI76_RS12395	0.47	-1.9
2,589,495	+		BWI76_RS12395	0.59	+0.2
2,589,581	+		BWI76_RS12395	0.67	-1.5
2,589,605	+		BWI76_RS12395	0.70	-0.2
2,589,660	+		BWI76_RS12395	0.75	+0.3
2,589,660	+		BWI76_RS12395	0.75	+1.5
2,589,660	+		BWI76_RS12395	0.75	-0.6
2,589,661	-		BWI76_RS12395	0.76	+0.8
2,589,668	-		BWI76_RS12395	0.76	-2.0
2,589,678	-		BWI76_RS12395	0.77	-2.0
2,589,687	+		BWI76_RS12395	0.78	-0.6
2,589,702	+		BWI76_RS12395	0.80	+0.8
2,589,708	+		BWI76_RS12395	0.80	-0.4
2,589,718	+		BWI76_RS12395	0.81	-0.2
2,589,750	+		BWI76_RS12395	0.85	+0.1
2,589,781	-		BWI76_RS12395	0.88	-0.2
2,589,789	+		BWI76_RS12395	0.89	+0.6
2,589,790	+		BWI76_RS12395	0.89	-0.5
2,589,797	-		BWI76_RS12395	0.89	+3.6
2,589,805	+				+0.2
2,589,807	-				+2.1
2,589,810	+				-0.2
2,589,813	+				-0.2
2,589,813	-				-0.1
2,589,815	+				-0.3
2,589,815	-				+1.6
2,589,822	-				-2.3
2,589,834	+				-0.2
2,589,854	+				-0.1
2,589,910	+				+0.5
2,589,910	+				+0.5
2,589,922	+				-0.0
2,589,956	+				-0.9
2,589,956	+				-0.2
2,589,964	+				-1.2
2,589,966	+				-0.2
2,589,972	-				+0.0
2,589,972	-				-2.0
2,589,972	-				-0.2
2,589,974	-				-0.6
2,589,979	-				-0.6
2,589,989	+				+2.1
2,590,005	-				-0.7
2,590,039	-		BWI76_RS12400	0.12	-2.4
2,590,039	-		BWI76_RS12400	0.12	-0.6
2,590,044	-		BWI76_RS12400	0.13	-1.7
2,590,085	-		BWI76_RS12400	0.19	+0.0
2,590,086	-		BWI76_RS12400	0.19	-0.3
2,590,201	-		BWI76_RS12400	0.37	-0.2
2,590,238	-		BWI76_RS12400	0.42	-0.5
2,590,340	-		BWI76_RS12400	0.58	-1.4
2,590,353	-		BWI76_RS12400	0.60	-1.5
2,590,362	-				+1.1
2,590,407	-		BWI76_RS12400	0.68	-1.1
2,590,524	+		BWI76_RS12400	0.86	+2.5
2,590,532	-		BWI76_RS12400	0.87	-1.4
2,590,532	-		BWI76_RS12400	0.87	+1.1
2,590,532	-		BWI76_RS12400	0.87	+0.1
2,590,532	-		BWI76_RS12400	0.87	-1.1
2,590,532	-		BWI76_RS12400	0.87	-0.2
2,590,613	+				-1.6
2,590,621	-				+0.1
2,590,621	-				+1.4
2,590,679	-				+0.1
2,590,743	+				+3.4
2,590,751	-				+2.8
2,590,751	-				-1.6
2,590,751	-				-0.2
2,590,751	-				-1.4
2,590,757	+				+1.1
2,590,765	-				-1.2
2,590,775	-				+2.1
2,590,775	-				-1.7
2,590,775	-				-0.1
2,590,775	-				+0.4
2,590,779	-				+1.1
2,590,781	-				+0.1
2,590,791	-				-0.7
2,590,801	+				-1.4
2,590,814	+				+3.1
2,590,822	-				-3.3
2,590,822	-				+0.1
2,590,822	-				+2.0
2,590,822	-				-0.7
2,590,822	-				+0.7
2,590,824	+				-0.7
2,590,835	+				-1.1
2,590,859	+				+0.4
2,590,931	+				+2.6
2,590,939	+				-0.2
2,590,939	+				+0.5
2,590,940	-				+2.1
2,590,940	-				+1.8
2,590,948	+				-2.0
2,590,956	-				-0.9
2,590,961	-				+1.3
2,590,977	+				+2.0
2,591,012	+				+0.9
2,591,015	+				+1.7
2,591,023	+				-0.2
2,591,023	+				-0.2
2,591,023	+				-0.7
2,591,023	+				-0.5
2,591,023	+				-1.4
2,591,023	+				-1.8
2,591,023	+				+0.3
2,591,023	+				+1.1
2,591,023	+				-0.5
2,591,023	+				-2.1
2,591,023	+				+1.2
2,591,023	+				+2.0
2,591,023	+				+0.9
2,591,031	-				+0.1
2,591,031	-				-1.6
2,591,031	-				+0.5
2,591,031	-				+0.5
2,591,031	-				+0.1
2,591,031	-				+1.1
2,591,031	-				-0.2
2,591,037	+				-2.3
2,591,037	+				+0.9
2,591,037	+				+2.1
2,591,044	-				+1.1
2,591,079	+				+2.1
2,591,159	-				-1.4
2,591,179	-				+0.1
2,591,216	-				+0.6
2,591,229	-				-3.4
2,591,235	-				+0.3
2,591,277	+		BWI76_RS12405	0.13	-2.1
2,591,285	-		BWI76_RS12405	0.13	-0.5
2,591,312	-				+2.1
2,591,400	+		BWI76_RS12405	0.23	+3.7
2,591,400	+		BWI76_RS12405	0.23	+2.4
2,591,400	+		BWI76_RS12405	0.23	+1.1
2,591,400	+		BWI76_RS12405	0.23	+3.1