Experiment: K. M5a1 KLEB23 MOI 1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS08440 and BWI76_RS08445 are separated by 185 nucleotides BWI76_RS08445 and BWI76_RS08450 are separated by 9 nucleotides
BWI76_RS08440: BWI76_RS08440 - hypothetical protein, at 1,786,734 to 1,787,636
_RS08440
BWI76_RS08445: BWI76_RS08445 - cob(I)yrinic acid a,c-diamide adenosyltransferase, at 1,787,822 to 1,788,424
_RS08445
BWI76_RS08450: BWI76_RS08450 - fumarate hydratase, at 1,788,434 to 1,790,086
_RS08450
Position (kb)
1787
1788
1789 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1786.826 kb on - strand, within BWI76_RS08440 at 1786.826 kb on - strand, within BWI76_RS08440 at 1786.830 kb on + strand, within BWI76_RS08440 at 1786.853 kb on + strand, within BWI76_RS08440 at 1786.853 kb on + strand, within BWI76_RS08440 at 1786.861 kb on - strand, within BWI76_RS08440 at 1786.862 kb on - strand, within BWI76_RS08440 at 1786.865 kb on + strand, within BWI76_RS08440 at 1786.934 kb on + strand, within BWI76_RS08440 at 1786.954 kb on + strand, within BWI76_RS08440 at 1787.020 kb on + strand, within BWI76_RS08440 at 1787.020 kb on + strand, within BWI76_RS08440 at 1787.020 kb on + strand, within BWI76_RS08440 at 1787.020 kb on + strand, within BWI76_RS08440 at 1787.020 kb on + strand, within BWI76_RS08440 at 1787.020 kb on + strand, within BWI76_RS08440 at 1787.020 kb on + strand, within BWI76_RS08440 at 1787.020 kb on + strand, within BWI76_RS08440 at 1787.020 kb on + strand, within BWI76_RS08440 at 1787.020 kb on + strand, within BWI76_RS08440 at 1787.020 kb on + strand, within BWI76_RS08440 at 1787.021 kb on - strand, within BWI76_RS08440 at 1787.026 kb on + strand, within BWI76_RS08440 at 1787.028 kb on - strand, within BWI76_RS08440 at 1787.028 kb on - strand at 1787.028 kb on - strand, within BWI76_RS08440 at 1787.028 kb on - strand, within BWI76_RS08440 at 1787.028 kb on - strand, within BWI76_RS08440 at 1787.028 kb on - strand, within BWI76_RS08440 at 1787.028 kb on - strand, within BWI76_RS08440 at 1787.028 kb on - strand, within BWI76_RS08440 at 1787.028 kb on - strand, within BWI76_RS08440 at 1787.028 kb on - strand, within BWI76_RS08440 at 1787.028 kb on - strand, within BWI76_RS08440 at 1787.033 kb on + strand, within BWI76_RS08440 at 1787.038 kb on + strand, within BWI76_RS08440 at 1787.043 kb on + strand, within BWI76_RS08440 at 1787.046 kb on - strand, within BWI76_RS08440 at 1787.046 kb on - strand, within BWI76_RS08440 at 1787.051 kb on - strand, within BWI76_RS08440 at 1787.053 kb on + strand, within BWI76_RS08440 at 1787.053 kb on + strand, within BWI76_RS08440 at 1787.053 kb on + strand, within BWI76_RS08440 at 1787.053 kb on - strand, within BWI76_RS08440 at 1787.065 kb on + strand, within BWI76_RS08440 at 1787.065 kb on + strand, within BWI76_RS08440 at 1787.065 kb on + strand, within BWI76_RS08440 at 1787.065 kb on + strand, within BWI76_RS08440 at 1787.065 kb on + strand, within BWI76_RS08440 at 1787.065 kb on + strand, within BWI76_RS08440 at 1787.065 kb on + strand, within BWI76_RS08440 at 1787.065 kb on + strand, within BWI76_RS08440 at 1787.065 kb on + strand, within BWI76_RS08440 at 1787.065 kb on + strand, within BWI76_RS08440 at 1787.065 kb on + strand, within BWI76_RS08440 at 1787.065 kb on + strand, within BWI76_RS08440 at 1787.065 kb on + strand, within BWI76_RS08440 at 1787.073 kb on - strand, within BWI76_RS08440 at 1787.073 kb on - strand at 1787.073 kb on - strand, within BWI76_RS08440 at 1787.073 kb on - strand, within BWI76_RS08440 at 1787.073 kb on - strand, within BWI76_RS08440 at 1787.073 kb on - strand, within BWI76_RS08440 at 1787.073 kb on - strand, within BWI76_RS08440 at 1787.073 kb on - strand, within BWI76_RS08440 at 1787.073 kb on - strand, within BWI76_RS08440 at 1787.073 kb on - strand, within BWI76_RS08440 at 1787.073 kb on - strand, within BWI76_RS08440 at 1787.073 kb on - strand, within BWI76_RS08440 at 1787.202 kb on + strand, within BWI76_RS08440 at 1787.246 kb on - strand, within BWI76_RS08440 at 1787.258 kb on + strand, within BWI76_RS08440 at 1787.323 kb on - strand, within BWI76_RS08440 at 1787.350 kb on + strand, within BWI76_RS08440 at 1787.406 kb on - strand, within BWI76_RS08440 at 1787.406 kb on - strand, within BWI76_RS08440 at 1787.614 kb on + strand at 1787.792 kb on - strand at 1787.913 kb on - strand, within BWI76_RS08445 at 1788.016 kb on + strand, within BWI76_RS08445 at 1788.018 kb on + strand, within BWI76_RS08445 at 1788.026 kb on - strand, within BWI76_RS08445 at 1788.186 kb on + strand, within BWI76_RS08445 at 1788.221 kb on - strand, within BWI76_RS08445 at 1788.280 kb on - strand, within BWI76_RS08445 at 1788.432 kb on + strand at 1788.585 kb on - strand at 1788.646 kb on + strand, within BWI76_RS08450 at 1788.761 kb on - strand, within BWI76_RS08450 at 1789.050 kb on + strand, within BWI76_RS08450 at 1789.139 kb on + strand, within BWI76_RS08450 at 1789.254 kb on + strand at 1789.254 kb on + strand, within BWI76_RS08450
Per-strain Table
Position Strand Gene LocusTag Fraction K. M5a1 KLEB23 MOI 1 remove 1,786,826 - BWI76_RS08440 0.10 +0.7 1,786,826 - BWI76_RS08440 0.10 +0.5 1,786,830 + BWI76_RS08440 0.11 -1.9 1,786,853 + BWI76_RS08440 0.13 +0.0 1,786,853 + BWI76_RS08440 0.13 -0.5 1,786,861 - BWI76_RS08440 0.14 -1.9 1,786,862 - BWI76_RS08440 0.14 +0.4 1,786,865 + BWI76_RS08440 0.15 -0.9 1,786,934 + BWI76_RS08440 0.22 -1.7 1,786,954 + BWI76_RS08440 0.24 -1.8 1,787,020 + BWI76_RS08440 0.32 -3.4 1,787,020 + BWI76_RS08440 0.32 +0.5 1,787,020 + BWI76_RS08440 0.32 -0.5 1,787,020 + BWI76_RS08440 0.32 +0.3 1,787,020 + BWI76_RS08440 0.32 -0.5 1,787,020 + BWI76_RS08440 0.32 -0.8 1,787,020 + BWI76_RS08440 0.32 -0.2 1,787,020 + BWI76_RS08440 0.32 -1.5 1,787,020 + BWI76_RS08440 0.32 +0.0 1,787,020 + BWI76_RS08440 0.32 +0.3 1,787,020 + BWI76_RS08440 0.32 +0.7 1,787,021 - BWI76_RS08440 0.32 +0.3 1,787,026 + BWI76_RS08440 0.32 +0.2 1,787,028 - BWI76_RS08440 0.33 -1.7 1,787,028 - +2.0 1,787,028 - BWI76_RS08440 0.33 -2.4 1,787,028 - BWI76_RS08440 0.33 +1.8 1,787,028 - BWI76_RS08440 0.33 -1.5 1,787,028 - BWI76_RS08440 0.33 +1.0 1,787,028 - BWI76_RS08440 0.33 -1.7 1,787,028 - BWI76_RS08440 0.33 +2.3 1,787,028 - BWI76_RS08440 0.33 +0.3 1,787,028 - BWI76_RS08440 0.33 -0.4 1,787,028 - BWI76_RS08440 0.33 +0.1 1,787,033 + BWI76_RS08440 0.33 +0.2 1,787,038 + BWI76_RS08440 0.34 -0.5 1,787,043 + BWI76_RS08440 0.34 -0.3 1,787,046 - BWI76_RS08440 0.35 -0.8 1,787,046 - BWI76_RS08440 0.35 -2.0 1,787,051 - BWI76_RS08440 0.35 -1.6 1,787,053 + BWI76_RS08440 0.35 -0.4 1,787,053 + BWI76_RS08440 0.35 -0.6 1,787,053 + BWI76_RS08440 0.35 +0.0 1,787,053 - BWI76_RS08440 0.35 -0.5 1,787,065 + BWI76_RS08440 0.37 -0.4 1,787,065 + BWI76_RS08440 0.37 -2.8 1,787,065 + BWI76_RS08440 0.37 -0.6 1,787,065 + BWI76_RS08440 0.37 -0.2 1,787,065 + BWI76_RS08440 0.37 -2.5 1,787,065 + BWI76_RS08440 0.37 +1.0 1,787,065 + BWI76_RS08440 0.37 +0.4 1,787,065 + BWI76_RS08440 0.37 -0.5 1,787,065 + BWI76_RS08440 0.37 -2.8 1,787,065 + BWI76_RS08440 0.37 +0.4 1,787,065 + BWI76_RS08440 0.37 +0.5 1,787,065 + BWI76_RS08440 0.37 +1.0 1,787,065 + BWI76_RS08440 0.37 -2.7 1,787,073 - BWI76_RS08440 0.38 -0.5 1,787,073 - -0.0 1,787,073 - BWI76_RS08440 0.38 -1.6 1,787,073 - BWI76_RS08440 0.38 -2.2 1,787,073 - BWI76_RS08440 0.38 +1.1 1,787,073 - BWI76_RS08440 0.38 +0.9 1,787,073 - BWI76_RS08440 0.38 +0.1 1,787,073 - BWI76_RS08440 0.38 +0.4 1,787,073 - BWI76_RS08440 0.38 -0.3 1,787,073 - BWI76_RS08440 0.38 -0.3 1,787,073 - BWI76_RS08440 0.38 -1.6 1,787,073 - BWI76_RS08440 0.38 -2.8 1,787,202 + BWI76_RS08440 0.52 +1.0 1,787,246 - BWI76_RS08440 0.57 -2.4 1,787,258 + BWI76_RS08440 0.58 -0.4 1,787,323 - BWI76_RS08440 0.65 +0.4 1,787,350 + BWI76_RS08440 0.68 -0.3 1,787,406 - BWI76_RS08440 0.74 -2.3 1,787,406 - BWI76_RS08440 0.74 +1.4 1,787,614 + -0.1 1,787,792 - +0.7 1,787,913 - BWI76_RS08445 0.15 -2.9 1,788,016 + BWI76_RS08445 0.32 -0.7 1,788,018 + BWI76_RS08445 0.33 -0.5 1,788,026 - BWI76_RS08445 0.34 +0.0 1,788,186 + BWI76_RS08445 0.60 -0.6 1,788,221 - BWI76_RS08445 0.66 -0.3 1,788,280 - BWI76_RS08445 0.76 -2.9 1,788,432 + -0.3 1,788,585 - -1.3 1,788,646 + BWI76_RS08450 0.13 +0.3 1,788,761 - BWI76_RS08450 0.20 -0.4 1,789,050 + BWI76_RS08450 0.37 -0.0 1,789,139 + BWI76_RS08450 0.43 +0.3 1,789,254 + -0.6 1,789,254 + BWI76_RS08450 0.50 +0.1
Or see this region's nucleotide sequence