Experiment: K. M5a1 KLEB23 MOI 1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS06495 and BWI76_RS06500 are separated by 479 nucleotides BWI76_RS06500 and BWI76_RS06505 are separated by 45 nucleotides BWI76_RS06505 and BWI76_RS06510 are separated by 303 nucleotides
BWI76_RS06495: BWI76_RS06495 - cytochrome ubiquinol oxidase subunit II, at 1,364,377 to 1,365,324
_RS06495
BWI76_RS06500: BWI76_RS06500 - muropeptide transporter AmpG, at 1,365,804 to 1,367,279
_RS06500
BWI76_RS06505: BWI76_RS06505 - hypothetical protein, at 1,367,325 to 1,367,903
_RS06505
BWI76_RS06510: BWI76_RS06510 - BolA family transcriptional regulator, at 1,368,207 to 1,368,524
_RS06510
Position (kb)
1365
1366
1367
1368 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 1364.831 kb on + strand at 1364.979 kb on + strand, within BWI76_RS06495 at 1364.979 kb on + strand, within BWI76_RS06495 at 1365.012 kb on - strand, within BWI76_RS06495 at 1365.036 kb on - strand, within BWI76_RS06495 at 1365.057 kb on - strand, within BWI76_RS06495 at 1365.072 kb on + strand, within BWI76_RS06495 at 1365.080 kb on - strand, within BWI76_RS06495 at 1365.086 kb on + strand, within BWI76_RS06495 at 1365.090 kb on - strand, within BWI76_RS06495 at 1365.090 kb on - strand, within BWI76_RS06495 at 1365.109 kb on - strand, within BWI76_RS06495 at 1365.148 kb on - strand, within BWI76_RS06495 at 1365.153 kb on - strand, within BWI76_RS06495 at 1365.175 kb on - strand, within BWI76_RS06495 at 1365.177 kb on + strand, within BWI76_RS06495 at 1365.200 kb on - strand, within BWI76_RS06495 at 1365.210 kb on - strand, within BWI76_RS06495 at 1365.212 kb on + strand, within BWI76_RS06495 at 1365.220 kb on - strand, within BWI76_RS06495 at 1365.230 kb on + strand at 1365.232 kb on - strand at 1365.233 kb on - strand at 1365.259 kb on + strand at 1365.259 kb on + strand at 1365.259 kb on + strand at 1365.259 kb on + strand at 1365.259 kb on + strand at 1365.259 kb on + strand at 1365.259 kb on + strand at 1365.259 kb on + strand at 1365.259 kb on + strand at 1365.261 kb on + strand at 1365.261 kb on + strand at 1365.261 kb on + strand at 1365.262 kb on - strand at 1365.267 kb on - strand at 1365.267 kb on - strand at 1365.267 kb on - strand at 1365.267 kb on - strand at 1365.267 kb on - strand at 1365.267 kb on - strand at 1365.267 kb on - strand at 1365.267 kb on - strand at 1365.267 kb on - strand at 1365.267 kb on - strand at 1365.267 kb on - strand at 1365.267 kb on - strand at 1365.267 kb on - strand at 1365.267 kb on - strand at 1365.267 kb on - strand at 1365.267 kb on - strand at 1365.269 kb on - strand at 1365.269 kb on - strand at 1365.269 kb on - strand at 1365.269 kb on - strand at 1365.269 kb on - strand at 1365.269 kb on - strand at 1365.356 kb on + strand at 1365.356 kb on + strand at 1365.356 kb on + strand at 1365.356 kb on + strand at 1365.364 kb on - strand at 1365.364 kb on - strand at 1365.364 kb on - strand at 1365.364 kb on - strand at 1365.365 kb on - strand at 1365.372 kb on - strand at 1365.398 kb on - strand at 1365.402 kb on + strand at 1365.403 kb on + strand at 1365.403 kb on + strand at 1365.403 kb on - strand at 1365.422 kb on + strand at 1365.422 kb on + strand at 1365.422 kb on + strand at 1365.429 kb on + strand at 1365.429 kb on - strand at 1365.429 kb on - strand at 1365.430 kb on - strand at 1365.430 kb on - strand at 1365.435 kb on + strand at 1365.435 kb on - strand at 1365.440 kb on + strand at 1365.443 kb on - strand at 1365.458 kb on + strand at 1365.458 kb on + strand at 1365.460 kb on + strand at 1365.460 kb on + strand at 1365.468 kb on + strand at 1365.468 kb on + strand at 1365.468 kb on + strand at 1365.476 kb on - strand at 1365.476 kb on - strand at 1365.521 kb on + strand at 1365.524 kb on - strand at 1365.536 kb on + strand at 1365.536 kb on - strand at 1365.550 kb on + strand at 1365.550 kb on + strand at 1365.570 kb on - strand at 1365.719 kb on + strand at 1365.783 kb on + strand at 1365.802 kb on + strand at 1365.812 kb on + strand at 1365.825 kb on - strand at 1365.827 kb on + strand at 1365.835 kb on - strand at 1365.850 kb on - strand at 1365.850 kb on - strand at 1365.876 kb on + strand at 1365.884 kb on - strand at 1365.884 kb on - strand at 1365.886 kb on + strand at 1365.894 kb on - strand at 1365.894 kb on - strand at 1365.894 kb on - strand at 1365.947 kb on + strand at 1365.998 kb on - strand, within BWI76_RS06500 at 1366.031 kb on + strand, within BWI76_RS06500 at 1366.031 kb on + strand, within BWI76_RS06500 at 1366.031 kb on + strand, within BWI76_RS06500 at 1366.058 kb on + strand, within BWI76_RS06500 at 1366.066 kb on - strand, within BWI76_RS06500 at 1366.066 kb on - strand, within BWI76_RS06500 at 1366.078 kb on + strand, within BWI76_RS06500 at 1366.103 kb on - strand, within BWI76_RS06500 at 1366.169 kb on - strand, within BWI76_RS06500 at 1366.177 kb on + strand, within BWI76_RS06500 at 1366.179 kb on - strand, within BWI76_RS06500 at 1366.222 kb on - strand, within BWI76_RS06500 at 1366.252 kb on + strand, within BWI76_RS06500 at 1366.327 kb on + strand, within BWI76_RS06500 at 1366.389 kb on - strand, within BWI76_RS06500 at 1366.401 kb on - strand, within BWI76_RS06500 at 1366.413 kb on + strand, within BWI76_RS06500 at 1366.441 kb on + strand, within BWI76_RS06500 at 1366.550 kb on + strand, within BWI76_RS06500 at 1366.598 kb on + strand, within BWI76_RS06500 at 1366.830 kb on - strand, within BWI76_RS06500 at 1367.101 kb on + strand, within BWI76_RS06500 at 1367.109 kb on - strand, within BWI76_RS06500 at 1367.394 kb on - strand, within BWI76_RS06505 at 1367.722 kb on + strand, within BWI76_RS06505 at 1367.825 kb on + strand, within BWI76_RS06505 at 1367.840 kb on + strand, within BWI76_RS06505 at 1367.860 kb on + strand at 1368.159 kb on + strand at 1368.214 kb on + strand at 1368.244 kb on - strand, within BWI76_RS06510 at 1368.276 kb on + strand, within BWI76_RS06510
Per-strain Table
Position Strand Gene LocusTag Fraction K. M5a1 KLEB23 MOI 1 remove 1,364,831 + +1.6 1,364,979 + BWI76_RS06495 0.64 +0.3 1,364,979 + BWI76_RS06495 0.64 -0.8 1,365,012 - BWI76_RS06495 0.67 +0.8 1,365,036 - BWI76_RS06495 0.70 +1.4 1,365,057 - BWI76_RS06495 0.72 +0.4 1,365,072 + BWI76_RS06495 0.73 +1.8 1,365,080 - BWI76_RS06495 0.74 -2.1 1,365,086 + BWI76_RS06495 0.75 -0.0 1,365,090 - BWI76_RS06495 0.75 -0.5 1,365,090 - BWI76_RS06495 0.75 +0.0 1,365,109 - BWI76_RS06495 0.77 +1.3 1,365,148 - BWI76_RS06495 0.81 +0.0 1,365,153 - BWI76_RS06495 0.82 +0.5 1,365,175 - BWI76_RS06495 0.84 -1.0 1,365,177 + BWI76_RS06495 0.84 -1.1 1,365,200 - BWI76_RS06495 0.87 +1.0 1,365,210 - BWI76_RS06495 0.88 +0.3 1,365,212 + BWI76_RS06495 0.88 -1.5 1,365,220 - BWI76_RS06495 0.89 -0.2 1,365,230 + +2.5 1,365,232 - -2.4 1,365,233 - -0.3 1,365,259 + -0.9 1,365,259 + +0.2 1,365,259 + +1.5 1,365,259 + -0.9 1,365,259 + +1.7 1,365,259 + +1.6 1,365,259 + +2.1 1,365,259 + +2.1 1,365,259 + +0.5 1,365,261 + -1.3 1,365,261 + +0.4 1,365,261 + +0.7 1,365,262 - +1.3 1,365,267 - +0.3 1,365,267 - +0.0 1,365,267 - +0.0 1,365,267 - +0.6 1,365,267 - -0.8 1,365,267 - -1.8 1,365,267 - -0.5 1,365,267 - -0.9 1,365,267 - -0.6 1,365,267 - +0.9 1,365,267 - +0.6 1,365,267 - -0.4 1,365,267 - -0.0 1,365,267 - +0.2 1,365,267 - +1.2 1,365,267 - -2.4 1,365,269 - +0.6 1,365,269 - +1.0 1,365,269 - +0.3 1,365,269 - -0.5 1,365,269 - +0.1 1,365,269 - -2.9 1,365,356 + -2.3 1,365,356 + +0.5 1,365,356 + -0.0 1,365,356 + -1.5 1,365,364 - +0.8 1,365,364 - +0.0 1,365,364 - +1.5 1,365,364 - +0.3 1,365,365 - +0.7 1,365,372 - -0.4 1,365,398 - -0.4 1,365,402 + +1.6 1,365,403 + +0.4 1,365,403 + +0.7 1,365,403 - +2.4 1,365,422 + -0.0 1,365,422 + +1.8 1,365,422 + +0.6 1,365,429 + +0.3 1,365,429 - +1.1 1,365,429 - +2.0 1,365,430 - +2.1 1,365,430 - +2.0 1,365,435 + +3.0 1,365,435 - +1.5 1,365,440 + -1.0 1,365,443 - +1.9 1,365,458 + +1.0 1,365,458 + +0.8 1,365,460 + +1.4 1,365,460 + +2.5 1,365,468 + +2.3 1,365,468 + -0.2 1,365,468 + +1.1 1,365,476 - +2.2 1,365,476 - +1.9 1,365,521 + +1.0 1,365,524 - +1.2 1,365,536 + -2.5 1,365,536 - +1.5 1,365,550 + +1.5 1,365,550 + +0.8 1,365,570 - +1.3 1,365,719 + +0.9 1,365,783 + +1.7 1,365,802 + +1.9 1,365,812 + +1.0 1,365,825 - +3.1 1,365,827 + +2.1 1,365,835 - +1.2 1,365,850 - +1.3 1,365,850 - +1.5 1,365,876 + +0.8 1,365,884 - +2.2 1,365,884 - +1.1 1,365,886 + +2.0 1,365,894 - +1.6 1,365,894 - +1.4 1,365,894 - +1.4 1,365,947 + +2.0 1,365,998 - BWI76_RS06500 0.13 +1.7 1,366,031 + BWI76_RS06500 0.15 +0.7 1,366,031 + BWI76_RS06500 0.15 +1.5 1,366,031 + BWI76_RS06500 0.15 +2.0 1,366,058 + BWI76_RS06500 0.17 +0.6 1,366,066 - BWI76_RS06500 0.18 +1.6 1,366,066 - BWI76_RS06500 0.18 +0.9 1,366,078 + BWI76_RS06500 0.19 +1.6 1,366,103 - BWI76_RS06500 0.20 +0.9 1,366,169 - BWI76_RS06500 0.25 +1.4 1,366,177 + BWI76_RS06500 0.25 +1.8 1,366,179 - BWI76_RS06500 0.25 +1.4 1,366,222 - BWI76_RS06500 0.28 +2.5 1,366,252 + BWI76_RS06500 0.30 +2.1 1,366,327 + BWI76_RS06500 0.35 +1.4 1,366,389 - BWI76_RS06500 0.40 +0.5 1,366,401 - BWI76_RS06500 0.40 +1.8 1,366,413 + BWI76_RS06500 0.41 +0.4 1,366,441 + BWI76_RS06500 0.43 +0.4 1,366,550 + BWI76_RS06500 0.51 +0.8 1,366,598 + BWI76_RS06500 0.54 +1.4 1,366,830 - BWI76_RS06500 0.70 +1.7 1,367,101 + BWI76_RS06500 0.88 +1.6 1,367,109 - BWI76_RS06500 0.88 +0.2 1,367,394 - BWI76_RS06505 0.12 +0.9 1,367,722 + BWI76_RS06505 0.69 +1.7 1,367,825 + BWI76_RS06505 0.86 +0.7 1,367,840 + BWI76_RS06505 0.89 -0.4 1,367,860 + +0.4 1,368,159 + -2.8 1,368,214 + +0.7 1,368,244 - BWI76_RS06510 0.12 +0.9 1,368,276 + BWI76_RS06510 0.22 +0.2
Or see this region's nucleotide sequence