Experiment: K. M5a1 KLEB23 MOI 1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS02950 and BWI76_RS02955 are separated by 26 nucleotides BWI76_RS02955 and BWI76_RS02960 are separated by 198 nucleotides
BWI76_RS02950: BWI76_RS02950 - 6-phospho-beta-glucosidase, at 602,763 to 604,070
_RS02950
BWI76_RS02955: BWI76_RS02955 - PTS system, cellobiose-specific IIC component, at 604,097 to 605,453
_RS02955
BWI76_RS02960: BWI76_RS02960 - glucohydrolase, at 605,652 to 607,307
_RS02960
Position (kb) 604
605
606 Strain fitness (log2 ratio) -2
-1
0
1
2 at 603.340 kb on + strand, within BWI76_RS02950 at 603.402 kb on + strand, within BWI76_RS02950 at 603.673 kb on + strand, within BWI76_RS02950 at 603.730 kb on - strand, within BWI76_RS02950 at 604.028 kb on + strand at 604.029 kb on + strand at 604.031 kb on - strand at 604.100 kb on - strand at 604.171 kb on + strand at 604.395 kb on + strand, within BWI76_RS02955 at 604.395 kb on + strand, within BWI76_RS02955 at 604.697 kb on - strand, within BWI76_RS02955 at 604.762 kb on + strand, within BWI76_RS02955 at 604.842 kb on + strand, within BWI76_RS02955 at 604.842 kb on + strand, within BWI76_RS02955 at 604.850 kb on - strand, within BWI76_RS02955 at 604.886 kb on - strand, within BWI76_RS02955 at 604.922 kb on - strand, within BWI76_RS02955 at 604.975 kb on + strand, within BWI76_RS02955 at 605.048 kb on - strand, within BWI76_RS02955 at 605.309 kb on + strand, within BWI76_RS02955 at 605.422 kb on + strand at 605.455 kb on + strand at 605.597 kb on + strand at 605.604 kb on + strand at 605.604 kb on + strand at 605.636 kb on - strand at 605.690 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction K. M5a1 KLEB23 MOI 1 remove 603,340 + BWI76_RS02950 0.44 +0.8 603,402 + BWI76_RS02950 0.49 -0.1 603,673 + BWI76_RS02950 0.70 -2.0 603,730 - BWI76_RS02950 0.74 +0.2 604,028 + +1.3 604,029 + +0.1 604,031 - -1.1 604,100 - -0.0 604,171 + +0.3 604,395 + BWI76_RS02955 0.22 +0.3 604,395 + BWI76_RS02955 0.22 +0.7 604,697 - BWI76_RS02955 0.44 +0.3 604,762 + BWI76_RS02955 0.49 +0.6 604,842 + BWI76_RS02955 0.55 +1.1 604,842 + BWI76_RS02955 0.55 +1.0 604,850 - BWI76_RS02955 0.55 +0.2 604,886 - BWI76_RS02955 0.58 +0.4 604,922 - BWI76_RS02955 0.61 +0.8 604,975 + BWI76_RS02955 0.65 +1.1 605,048 - BWI76_RS02955 0.70 +0.4 605,309 + BWI76_RS02955 0.89 +0.0 605,422 + +1.5 605,455 + +1.0 605,597 + +1.2 605,604 + +1.0 605,604 + +1.1 605,636 - +0.7 605,690 + +1.8
Or see this region's nucleotide sequence