Experiment: K. M5a1 KLEB23 MOI 1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS00265 and BWI76_RS00270 are separated by 182 nucleotides BWI76_RS00270 and BWI76_RS00275 are separated by 10 nucleotides
BWI76_RS00265: BWI76_RS00265 - potassium transporter Kup, at 54,258 to 56,126
_RS00265
BWI76_RS00270: BWI76_RS00270 - D-ribose pyranase (EC 5.4.99.62) <small>(from data)</small>, at 56,309 to 56,728
_RS00270
BWI76_RS00275: BWI76_RS00275 - ribose ABC transporter ATP-binding protein RbsA, at 56,739 to 58,244
_RS00275
Position (kb) 56
57 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4 at 55.336 kb on + strand, within BWI76_RS00265 at 55.336 kb on + strand, within BWI76_RS00265 at 55.336 kb on + strand at 55.336 kb on + strand, within BWI76_RS00265 at 55.344 kb on - strand, within BWI76_RS00265 at 55.358 kb on + strand, within BWI76_RS00265 at 55.360 kb on + strand, within BWI76_RS00265 at 55.368 kb on - strand, within BWI76_RS00265 at 55.368 kb on - strand, within BWI76_RS00265 at 55.580 kb on - strand, within BWI76_RS00265 at 55.697 kb on - strand, within BWI76_RS00265 at 55.728 kb on + strand, within BWI76_RS00265 at 55.745 kb on + strand, within BWI76_RS00265 at 55.810 kb on + strand, within BWI76_RS00265 at 55.932 kb on + strand, within BWI76_RS00265 at 55.932 kb on + strand, within BWI76_RS00265 at 55.940 kb on - strand at 56.062 kb on + strand at 56.370 kb on - strand, within BWI76_RS00270 at 56.429 kb on + strand, within BWI76_RS00270 at 56.435 kb on + strand, within BWI76_RS00270 at 56.540 kb on - strand, within BWI76_RS00270 at 56.568 kb on + strand, within BWI76_RS00270 at 56.576 kb on - strand, within BWI76_RS00270 at 56.576 kb on - strand, within BWI76_RS00270 at 56.576 kb on - strand, within BWI76_RS00270 at 56.578 kb on + strand, within BWI76_RS00270 at 56.738 kb on + strand at 56.747 kb on - strand at 56.943 kb on + strand, within BWI76_RS00275 at 57.201 kb on + strand, within BWI76_RS00275 at 57.249 kb on - strand, within BWI76_RS00275 at 57.329 kb on - strand, within BWI76_RS00275 at 57.400 kb on - strand, within BWI76_RS00275 at 57.553 kb on + strand, within BWI76_RS00275 at 57.596 kb on + strand, within BWI76_RS00275 at 57.628 kb on - strand, within BWI76_RS00275 at 57.640 kb on - strand, within BWI76_RS00275 at 57.661 kb on + strand, within BWI76_RS00275 at 57.669 kb on - strand, within BWI76_RS00275 at 57.726 kb on + strand, within BWI76_RS00275
Per-strain Table
Position Strand Gene LocusTag Fraction K. M5a1 KLEB23 MOI 1 remove 55,336 + BWI76_RS00265 0.58 +0.5 55,336 + BWI76_RS00265 0.58 +0.4 55,336 + -0.8 55,336 + BWI76_RS00265 0.58 +1.1 55,344 - BWI76_RS00265 0.58 -0.6 55,358 + BWI76_RS00265 0.59 +0.8 55,360 + BWI76_RS00265 0.59 -0.1 55,368 - BWI76_RS00265 0.59 -0.9 55,368 - BWI76_RS00265 0.59 +0.7 55,580 - BWI76_RS00265 0.71 +0.5 55,697 - BWI76_RS00265 0.77 +1.4 55,728 + BWI76_RS00265 0.79 -2.5 55,745 + BWI76_RS00265 0.80 +1.0 55,810 + BWI76_RS00265 0.83 +2.9 55,932 + BWI76_RS00265 0.90 -0.1 55,932 + BWI76_RS00265 0.90 +0.5 55,940 - +0.5 56,062 + +0.2 56,370 - BWI76_RS00270 0.15 +0.2 56,429 + BWI76_RS00270 0.29 +0.4 56,435 + BWI76_RS00270 0.30 +0.2 56,540 - BWI76_RS00270 0.55 +1.1 56,568 + BWI76_RS00270 0.62 -3.2 56,576 - BWI76_RS00270 0.64 -0.2 56,576 - BWI76_RS00270 0.64 +0.7 56,576 - BWI76_RS00270 0.64 +0.8 56,578 + BWI76_RS00270 0.64 -0.6 56,738 + +1.5 56,747 - -0.2 56,943 + BWI76_RS00275 0.14 +0.8 57,201 + BWI76_RS00275 0.31 +1.2 57,249 - BWI76_RS00275 0.34 +1.2 57,329 - BWI76_RS00275 0.39 -0.1 57,400 - BWI76_RS00275 0.44 +4.0 57,553 + BWI76_RS00275 0.54 +0.3 57,596 + BWI76_RS00275 0.57 +1.1 57,628 - BWI76_RS00275 0.59 -0.5 57,640 - BWI76_RS00275 0.60 -0.2 57,661 + BWI76_RS00275 0.61 +0.7 57,669 - BWI76_RS00275 0.62 -0.1 57,726 + BWI76_RS00275 0.66 +0.8
Or see this region's nucleotide sequence