Experiment: K. M5a1 KLEB23 MOI 1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS20460 and BWI76_RS20465 are separated by 160 nucleotides BWI76_RS20465 and BWI76_RS20470 are separated by 372 nucleotides
BWI76_RS20460: BWI76_RS20460 - acetyl-CoA C-acyltransferase FadI, at 4,282,960 to 4,284,270
_RS20460
BWI76_RS20465: BWI76_RS20465 - hypothetical protein, at 4,284,431 to 4,284,715
_RS20465
BWI76_RS20470: BWI76_RS20470 - long-chain fatty acid transporter, at 4,285,088 to 4,286,452
_RS20470
Position (kb)
4284
4285 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4 at 4283.625 kb on - strand, within BWI76_RS20460 at 4283.648 kb on - strand at 4283.796 kb on + strand, within BWI76_RS20460 at 4283.897 kb on - strand, within BWI76_RS20460 at 4284.142 kb on + strand at 4284.172 kb on + strand at 4284.220 kb on - strand at 4284.263 kb on - strand at 4284.280 kb on + strand at 4284.401 kb on - strand at 4284.496 kb on + strand, within BWI76_RS20465 at 4284.509 kb on + strand, within BWI76_RS20465 at 4284.525 kb on - strand, within BWI76_RS20465 at 4284.532 kb on - strand at 4284.675 kb on - strand, within BWI76_RS20465 at 4284.694 kb on + strand at 4284.704 kb on + strand at 4284.704 kb on + strand at 4284.965 kb on + strand at 4284.978 kb on - strand at 4284.980 kb on - strand at 4284.997 kb on - strand at 4285.024 kb on - strand at 4285.156 kb on - strand at 4285.156 kb on - strand at 4285.161 kb on - strand at 4285.328 kb on - strand, within BWI76_RS20470 at 4285.397 kb on - strand, within BWI76_RS20470
Per-strain Table
Position Strand Gene LocusTag Fraction K. M5a1 KLEB23 MOI 1 remove 4,283,625 - BWI76_RS20460 0.51 +2.6 4,283,648 - +0.7 4,283,796 + BWI76_RS20460 0.64 -1.2 4,283,897 - BWI76_RS20460 0.71 -0.5 4,284,142 + -0.8 4,284,172 + -2.9 4,284,220 - -0.1 4,284,263 - -0.4 4,284,280 + -1.7 4,284,401 - -0.3 4,284,496 + BWI76_RS20465 0.23 +0.3 4,284,509 + BWI76_RS20465 0.27 -1.0 4,284,525 - BWI76_RS20465 0.33 -2.2 4,284,532 - +0.9 4,284,675 - BWI76_RS20465 0.86 -1.4 4,284,694 + -0.8 4,284,704 + -0.5 4,284,704 + +0.8 4,284,965 + +1.0 4,284,978 - -0.1 4,284,980 - -0.2 4,284,997 - -1.0 4,285,024 - -0.1 4,285,156 - +4.7 4,285,156 - -1.3 4,285,161 - -1.2 4,285,328 - BWI76_RS20470 0.18 -0.8 4,285,397 - BWI76_RS20470 0.23 -2.0
Or see this region's nucleotide sequence