Experiment: K. M5a1 KLEB23 MOI 1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS08625 and BWI76_RS08630 are separated by 205 nucleotides BWI76_RS08630 and BWI76_RS08635 are separated by 67 nucleotides
BWI76_RS08625: BWI76_RS08625 - UDP-glucose 4-epimerase GalE, at 1,819,328 to 1,820,339
_RS08625
BWI76_RS08630: BWI76_RS08630 - molybdate ABC transporter ATP-binding protein ModF, at 1,820,545 to 1,822,020
_RS08630
BWI76_RS08635: BWI76_RS08635 - molybdenum-dependent transcriptional regulator, at 1,822,088 to 1,822,876
_RS08635
Position (kb)
1820
1821
1822
1823 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1819.567 kb on - strand, within BWI76_RS08625 at 1819.866 kb on - strand, within BWI76_RS08625 at 1820.532 kb on + strand at 1820.540 kb on - strand at 1820.598 kb on + strand at 1820.623 kb on - strand at 1820.672 kb on + strand at 1820.706 kb on + strand, within BWI76_RS08630 at 1820.721 kb on + strand, within BWI76_RS08630 at 1820.890 kb on - strand, within BWI76_RS08630 at 1821.077 kb on + strand, within BWI76_RS08630 at 1821.092 kb on - strand, within BWI76_RS08630 at 1821.555 kb on + strand, within BWI76_RS08630 at 1821.580 kb on + strand, within BWI76_RS08630 at 1821.748 kb on + strand, within BWI76_RS08630 at 1821.952 kb on - strand at 1822.063 kb on - strand at 1822.231 kb on + strand, within BWI76_RS08635 at 1822.565 kb on + strand, within BWI76_RS08635 at 1822.640 kb on + strand, within BWI76_RS08635 at 1822.661 kb on + strand, within BWI76_RS08635 at 1822.711 kb on - strand, within BWI76_RS08635 at 1822.792 kb on - strand, within BWI76_RS08635 at 1822.807 kb on + strand at 1822.959 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction K. M5a1 KLEB23 MOI 1 remove 1,819,567 - BWI76_RS08625 0.24 -1.3 1,819,866 - BWI76_RS08625 0.53 +0.7 1,820,532 + -1.8 1,820,540 - -2.5 1,820,598 + +0.5 1,820,623 - +0.6 1,820,672 + -0.2 1,820,706 + BWI76_RS08630 0.11 -0.7 1,820,721 + BWI76_RS08630 0.12 -0.1 1,820,890 - BWI76_RS08630 0.23 -0.8 1,821,077 + BWI76_RS08630 0.36 -1.2 1,821,092 - BWI76_RS08630 0.37 -0.8 1,821,555 + BWI76_RS08630 0.68 -0.9 1,821,580 + BWI76_RS08630 0.70 +2.3 1,821,748 + BWI76_RS08630 0.82 +0.8 1,821,952 - +0.6 1,822,063 - +0.5 1,822,231 + BWI76_RS08635 0.18 +0.7 1,822,565 + BWI76_RS08635 0.60 -0.2 1,822,640 + BWI76_RS08635 0.70 +2.2 1,822,661 + BWI76_RS08635 0.73 +0.8 1,822,711 - BWI76_RS08635 0.79 -0.3 1,822,792 - BWI76_RS08635 0.89 +0.9 1,822,807 + -0.9 1,822,959 + -2.3
Or see this region's nucleotide sequence